Gene: PGSC0003DMG400012781
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400012781
- Transcript Identifier PGSC0003DMT400033276
- Gene Type Coding gene
- Location ST4.03ch12 : 45080947-45087783 : negative
Gene Family Information
- ID HOM05D004522
- #Genes/#Species 159/97
- Phylogenetic origin
- ID ORTHO05D005887
- #Genes/#Species 150/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 37447971
- id PGSC0003DMG400012781.v4.03
- uniprot M1AYW3
Descriptions
- Description DNA topoisomerase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006265 | IEA | GOA Database | DNA topological change | |
| GO:0006265 | IEA | InterPro | DNA topological change |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003917 | IEA | GOA Database | DNA topoisomerase type I (single strand cut, ATP-independent) activity | |
| GO:0003917 | IEA | InterPro | DNA topoisomerase type I (single strand cut, ATP-independent) activity | |
| GO:0003916 | IEA | GOA Database | DNA topoisomerase activity | |
| GO:0003916 | IEA | InterPro | DNA topoisomerase activity | |
| GO:0016853 | IEA | GOA Database | isomerase activity | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT4G31210 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005694 | ISO | PLAZA Homology (enrichment) | chromosome | HOM05D004522 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000380 | DNA topoisomerase, type IA |
| IPR023405 | DNA topoisomerase, type IA, core domain |
| IPR013826 | DNA topoisomerase, type IA, central region, subdomain 3 |
| IPR013497 | DNA topoisomerase, type IA, central |
| IPR013824 | DNA topoisomerase, type IA, central region, subdomain 1 |
| IPR003601 | DNA topoisomerase, type IA, domain 2 |
| IPR003602 | DNA topoisomerase, type IA, DNA-binding domain |
| Mapman id | Description |
|---|---|
| 13.5.4 | Cell cycle organisation.organellar DNA replication.type-Ia DNA topoisomerase |