Gene: Sed0008341
General Information
Structural Information
- Species Sechium edule
- Gene Identifier Sed0008341
- Transcript Identifier Sed0008341.1
- Gene Type Coding gene
- Location LG05 : 30241069-30259479 : negative
Gene Family Information
- ID HOM05D004522
- #Genes/#Species 159/97
- Phylogenetic origin
- ID ORTHO05D005887
- #Genes/#Species 150/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sed0008341.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006265 | IEA | InterPro | DNA topological change |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003916 | IEA | InterPro | DNA topoisomerase activity | |
| GO:0003917 | IEA | InterPro | DNA topoisomerase type I (single strand cut, ATP-independent) activity | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT4G31210 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005694 | IEA | InterPro | chromosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003602 | DNA topoisomerase, type IA, DNA-binding domain |
| IPR006171 | TOPRIM domain |
| IPR013497 | DNA topoisomerase, type IA, central |
| IPR013498 | DNA topoisomerase, type IA, zn finger |
| IPR023405 | DNA topoisomerase, type IA, core domain |
| IPR000380 | DNA topoisomerase, type IA |
| IPR013826 | DNA topoisomerase, type IA, central region, subdomain 3 |
| IPR034149 | DNA topoisomerase 1, TOPRIM domain |
| IPR005733 | DNA topoisomerase I, bacterial-type |
| IPR013824 | DNA topoisomerase, type IA, central region, subdomain 1 |
| IPR013825 | DNA topoisomerase, type IA, central region, subdomain 2 |
| IPR003601 | DNA topoisomerase, type IA, domain 2 |
| IPR025589 | Topoisomerase C-terminal repeat |
| Mapman id | Description |
|---|---|
| 13.5.4 | Cell cycle organisation.organellar DNA replication.type-Ia DNA topoisomerase |