Gene: Cpa.g.sc246.5

General Information

Structural Information

  • Species Carica papaya
  • Gene Identifier Cpa.g.sc246.5
  • Transcript Identifier Cpa.t.sc246.5
  • Gene Type Coding gene
  • Location supercontig_246 : 49905-52634 : negative

Gene Family Information

  • ID HOM05D004522
  • #Genes/#Species 159/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 16414636
  • tid PAC:16414636
  • id evm.TU.supercontig_246.5

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006265
IEA
InterProDNA topological change

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003916
IEA
InterProDNA topoisomerase activity
GO:0003917
IEA
InterProDNA topoisomerase type I (single strand cut, ATP-independent) activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G31210

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005694
ISO
PLAZA Homology (enrichment)chromosome HOM05D004522

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006171 TOPRIM domain
IPR013497 DNA topoisomerase, type IA, central
IPR023405 DNA topoisomerase, type IA, core domain
IPR034149 DNA topoisomerase 1, TOPRIM domain
IPR013826 DNA topoisomerase, type IA, central region, subdomain 3
IPR003601 DNA topoisomerase, type IA, domain 2
IPR000380 DNA topoisomerase, type IA
IPR013824 DNA topoisomerase, type IA, central region, subdomain 1
Mapman id Description
13.5.4 Cell cycle organisation.organellar DNA replication.type-Ia DNA topoisomerase