Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p33280 Brassica napus
A07p16860 Brassica napus
Aa31LG1G15620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.1626 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2693 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2703__2704 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2706 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.416 Anthoceros agrestis
Actinidia12045 Actinidia chinensis
Ah.03g145340 Amaranthus hybridus
AL74U10010 Arabidopsis lyrata
AL8G20700 Arabidopsis lyrata
AL8G22110 Arabidopsis lyrata
AL8G22120 Arabidopsis lyrata
AL8G44260 Arabidopsis lyrata
Aqoxy7G02851 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7M3CIR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EE0YL2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KW6QS2 Arachis hypogaea
AT5G67100 Arabidopsis thaliana
ATR0584G066 Amborella trichopoda
Atru.chr3.306 Acer truncatum
AUR62001915 Chenopodium quinoa
AUR62003893 Chenopodium quinoa
AUR62033825 Chenopodium quinoa
BcaB02g09958 Brassica carinata
BcaC03g17194 Brassica carinata
BcaC06g34790 Brassica carinata
BcaC06g34793 Brassica carinata
BolC2t11212H Brassica oleracea
BolC7t42987H Brassica oleracea
BraA02t08352Z Brassica rapa
BraA07t29411Z Brassica rapa
C02p51210 Brassica napus
C07p24670 Brassica napus
CAN.G370.48 Capsicum annuum
CAN.G370.49 Capsicum annuum
CANSAT01G0155 Cannabis sativa
CARHR066690 Cardamine hirsuta
CARHR280550 Cardamine hirsuta
Carub.0008s0466 Capsella rubella
Carub.0008s2741 Capsella rubella
Ca_24759_v3 Cicer arietinum L.
Cc07_g06110 Coffea canephora
CDE04G1072 Ceratophyllum demersum
Cfa004033 Carpinus fangiana
Cfa026638 Carpinus fangiana
Ciclev10024699m.g Citrus clementina
CiPaw.01G016700 Carya illinoinensis
ClCG02G012370 Citrullus lanatus
COL.COLO4_11441 Corchorus olitorius
Cpa.g.sc55.134 Carica papaya
Cre04.g214350 Chlamydomonas reinhardtii
CsaV3_2G016500 Cucumis sativus L.
CSS0049451 Camellia sinensis var. sinensis
DCAR_025744 Daucus carota
Dinv26836 Davidia involucrata
Dinv29997 Davidia involucrata
Dinv29999 Davidia involucrata
Duzib147G0141 Durio zibethinus
ECA238G4385 Erigeron canadensis
EL10Ac6g15730 Beta vulgaris
Eucgr.H01686 Eucalyptus grandis
FAN19G2019 Fragaria x ananassa
FAN23G1634 Fragaria x ananassa
FAN26G0646 Fragaria x ananassa
FvH4_1g22730 Fragaria vesca
Glyma.01G187400 Glycine max
Glyma.13G029600 Glycine max
Gohir.A11G193200 Gossypium hirsutum
Gohir.D11G200300 Gossypium hirsutum
Gorai.007G214600 Gossypium raimondii
GSVIVG01022113001 Vitis vinifera
HanXRQChr14g0449061 Helianthus annuus
Haze_15381 Corylus avellana
Hma1.2p1_0017F.1_g011490 Hydrangea macrophylla
Hma1.2p1_0017F.1_g011500 Hydrangea macrophylla
HPP92_025019 Vanilla planifolia
HPP92_025047 Vanilla planifolia
Hund16343 Selenicereus undatus
Lalb_Chr09g0323231 Lupinus albus
Lj2g0014817 Lotus japonicus
Lj3g0019632 Lotus japonicus
Lj7C70T9 Lonicera japonica
Lsat_1_v5_gn_2_84960 Lactuca sativa
Lsat_1_v5_gn_5_12941 Lactuca sativa
Lsat_1_v5_gn_6_106120 Lactuca sativa
Manes.13G122900 Manihot esculenta
Mapoly0074s0003 Marchantia polymorpha
MCO16G420 Micromonas commoda
MD02G1174100 Malus domestica
MD02G1174200 Malus domestica
MD02G1174400 Malus domestica
MD15G1285400 Malus domestica
Medtr5g017070 Medicago truncatula
MELO3C020860.2 Cucumis melo
Migut.H00422 Erythranthe guttata
MSTRG.23740 Avicennia marina
Nitab4.5_0002029g0030 Nicotiana tabacum
Nitab4.5_0003519g0040 Nicotiana tabacum
Nn5g30338 Nelumbo nucifera
Oeu020531.3 Olea europaea
Oeu023198.1 Olea europaea
Os01g0868300 Oryza sativa ssp. japonica
Peaxi162Scf00450g00127 Petunia axillaris
PGR102G1820 Punica granatum
Phvul.002G017900 Phaseolus vulgaris
Phvul.009G084750 Phaseolus vulgaris
Potri.007G045300 Populus trichocarpa
Pp3c10_5470 Physcomitrium patens
Pp3c1_21120 Physcomitrium patens
PRCOL_00001322 Prasinoderma coloniale
Prupe.7G131600 Prunus persica
Psat2g166640 Pisum sativum
PSO541G2052 Papaver somniferum
PSO541G3830 Papaver somniferum
PSO675G1845 Papaver somniferum
QL06p040994 Quercus lobata
RcHm_v2.0_Chr2g0109901 Rosa chinensis
RcHm_v2.0_Chr2g0117021 Rosa chinensis
RcHm_v2.0_Chr2g0168121 Rosa chinensis
RcHm_v2.0_Chr4g0394581 Rosa chinensis
Rhsim10G0115900 Rhododendron simsii
Sabra07G0040300 Salix brachista
Sc03g0001670 Simmondsia chinensis
Sed0002898 Sechium edule
SEGI_19753 Sequoiadendron giganteum
SEGI_21985 Sequoiadendron giganteum
SEGI_27405 Sequoiadendron giganteum
SEGI_29171 Sequoiadendron giganteum
SEGI_30504 Sequoiadendron giganteum
SEGI_39908 Sequoiadendron giganteum
SEGI_41015 Sequoiadendron giganteum
SGA_v2.0_scaffold15G07321 Striga asiatica
SGA_v2.0_scaffold46G17397 Striga asiatica
SHI09536 Sapria himalayana
SHI09538 Sapria himalayana
SHI09541 Sapria himalayana
SHI09542 Sapria himalayana
SHI09543 Sapria himalayana
SHI09544 Sapria himalayana
SMO144G0147 Selaginella moellendorffii
SMO229G0008 Selaginella moellendorffii
SMO335G0007 Selaginella moellendorffii
Solyc02g093300.3 Solanum lycopersicum
Sopen02g037860 Solanum pennellii
Sp2g29580 Schrenkiella parvula
TAR376G0722 Trochodendron aralioides
TAR628G0670 Trochodendron aralioides
TAR628G1372 Trochodendron aralioides
THA.LOC104827210 Tarenaya hassleriana
Thecc.01G058600 Theobroma cacao
Thhalv10003515m.g Eutrema salsugineum
TPR.G16152 Trifolium pratense
TPR.G24574 Trifolium pratense
TPR.G26879 Trifolium pratense
TPR.G26904 Trifolium pratense
TPR.G38065 Trifolium pratense
TWI09G1157 Tripterygium wilfordii
unitig_899.g14946 Utricularia gibba
vmacro05947 Vaccinium macrocarpon
VMungo0464G2085 Vigna mungo
VMungo1215G1933 Vigna mungo
Zm00001eb146610 Zea mays

User provided reference genes

Program Settings