Gene: Os01g0868300

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os01g0868300
  • Transcript Identifier Os01t0868300-01
  • Gene Type Coding gene
  • Location chr01 : 37626156-37636034 : negative

Gene Family Information

  • ID HOM05D004344
  • #Genes/#Species 164/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os01t0868300-01
  • MSU-ID LOC_Os01g64820.1
  • uniprot O48653

Descriptions

  • Description Similar to DNA polymerase alpha catalytic subunit (EC 2.7.7.7).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006273
IDA, IEP
IBA
GOA Databaselagging strand elongation
GO:1902975
IBA
GOA Databasemitotic DNA replication initiation
GO:0006272
IBA
GOA Databaseleading strand elongation
GO:0009965
IEA
GOA Databaseleaf morphogenesis
GO:0006260
IEA
GOA DatabaseDNA replication
GO:0006260
IEA
InterProDNA replication
GO:0006269
IEA
GOA DatabaseDNA replication, synthesis of RNA primer
GO:0006270
IDA, IEP
GOA DatabaseDNA replication initiation
GO:0071897
IEA
GOA DatabaseDNA biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0003887
IDA
ISS, IBA
IEA
GOA DatabaseDNA-directed DNA polymerase activity
GO:0003887
IEA
InterProDNA-directed DNA polymerase activity
GO:0003697
IBA
GOA Databasesingle-stranded DNA binding
GO:0003688
IBA
GOA DatabaseDNA replication origin binding
GO:0003682
IBA
GOA Databasechromatin binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0017076
IBA
GOA Databasepurine nucleotide binding
GO:0019103
IBA
GOA Databasepyrimidine nucleotide binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003896
IDA
GOA DatabaseDNA primase activity
GO:0051539
IEA
GOA Database4 iron, 4 sulfur cluster binding
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005658
IBA
GOA Databasealpha DNA polymerase:primase complex
GO:0005634
IDA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006172 DNA-directed DNA polymerase, family B
IPR015088 Zinc finger, DNA-directed DNA polymerase, family B, alpha
IPR038256 DNA polymerase alpha, zinc finger domain superfamily
IPR012337 Ribonuclease H-like superfamily
IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain
IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain
IPR024647 DNA polymerase alpha catalytic subunit, N-terminal domain
IPR036397 Ribonuclease H superfamily
IPR023211 DNA polymerase, palm domain superfamily
IPR042087 DNA polymerase family B, thumb domain
IPR043502 DNA/RNA polymerase superfamily
Mapman id Description
13.2.3.1.1 Cell cycle organisation.DNA replication.elongation.DNA polymerase alpha complex.catalytic component POLA1