Gene: COL.COLO4_11441

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_11441
  • Transcript Identifier COL.rna10234
  • Gene Type Coding gene
  • Location AWUE01014697.1 : 20541-26143 : positive

Gene Family Information

  • ID HOM05D004344
  • #Genes/#Species 164/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna10234
  • GenBank OMP01980.1
  • id gene11413
  • gene_name COLO4_11441
  • uniprot A0A1R3K4F7

Descriptions

  • Description DNA-directed DNA polymerase, family B, pol2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009965
ISO
PLAZA Integrative Orthologyleaf morphogenesis AT5G67100
GO:0006260
ISO
PLAZA Homology (enrichment)DNA replication HOM05D004344
GO:0006273
ISO
PLAZA Integrative Orthologylagging strand elongation Os01g0868300
GO:0006270
ISO
PLAZA Integrative OrthologyDNA replication initiation Os01g0868300
GO:0071897
IEA
GOA DatabaseDNA biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003896
ISO
PLAZA Integrative OrthologyDNA primase activity Os01g0868300
GO:0003887
IEA
GOA DatabaseDNA-directed DNA polymerase activity
GO:0003887
IEA
InterProDNA-directed DNA polymerase activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os01g0868300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain
IPR043502 DNA/RNA polymerase superfamily
IPR006172 DNA-directed DNA polymerase, family B
IPR024647 DNA polymerase alpha catalytic subunit, N-terminal domain
IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain
IPR023211 DNA polymerase, palm domain superfamily
IPR036397 Ribonuclease H superfamily
IPR012337 Ribonuclease H-like superfamily
Mapman id Description
13.2.3.1.1 Cell cycle organisation.DNA replication.elongation.DNA polymerase alpha complex.catalytic component POLA1