Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p17410 Brassica napus
A07p30590 Brassica napus
Aa31LG4G8830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.143 Anthoceros agrestis
Actinidia24638 Actinidia chinensis
Actinidia33386 Actinidia chinensis
Ah.05g168420 Amaranthus hybridus
AL2G31370 Arabidopsis lyrata
Aqoxy5G01970 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BJW38K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XP62BS Arachis hypogaea
AT1G71800 Arabidopsis thaliana
ATR0661G572 Amborella trichopoda
Atru.chr13.1954 Acer truncatum
AUR62022307 Chenopodium quinoa
AUR62034933 Chenopodium quinoa
BcaB03g15618 Brassica carinata
BcaB05g24678 Brassica carinata
BcaC03g15300 Brassica carinata
BcaC08g45756 Brassica carinata
BolC2t08959H Brassica oleracea
BolC6t38642H Brassica oleracea
BraA02t06786Z Brassica rapa
BraA07t30694Z Brassica rapa
C02p29110 Brassica napus
C06p35370 Brassica napus
CAN.G1166.27 Capsicum annuum
CANSAT25G1166 Cannabis sativa
CARHR290980 Cardamine hirsuta
Carub.0002s1856 Capsella rubella
Ca_10640_v3 Cicer arietinum L.
CBR_g33965 Chara braunii
Cc09_g05020 Coffea canephora
CDE04G2415 Ceratophyllum demersum
CDE07G0240 Ceratophyllum demersum
Cfa018249 Carpinus fangiana
Cfa025171 Carpinus fangiana
Ciclev10000749m.g Citrus clementina
CiPaw.15G010600 Carya illinoinensis
CiPaw.15G010700 Carya illinoinensis
CiPaw.15G010800 Carya illinoinensis
CiPaw.16G006400 Carya illinoinensis
ClCG08G008770 Citrullus lanatus
Cpa.g.sc26.136 Carica papaya
Cpa.g.sc26.137 Carica papaya
Cre01.g024200 Chlamydomonas reinhardtii
Cre02.g084750 Chlamydomonas reinhardtii
CsaV3_6G004790 Cucumis sativus L.
CSS0012598 Camellia sinensis var. sinensis
CSS0023855 Camellia sinensis var. sinensis
CSS0048022 Camellia sinensis var. sinensis
DCAR_003088 Daucus carota
Duzib116G0903 Durio zibethinus
Duzib211G0120 Durio zibethinus
ECA247G0282 Erigeron canadensis
EL10Ac1g01744 Beta vulgaris
Eucgr.F02667 Eucalyptus grandis
FAN02G0328 Fragaria x ananassa
FAN05G2365 Fragaria x ananassa
FAN09G3681 Fragaria x ananassa
FAN09G4196 Fragaria x ananassa
FAN14G4957 Fragaria x ananassa
FAN14G5515 Fragaria x ananassa
FAN15G1722 Fragaria x ananassa
FAN24G0594 Fragaria x ananassa
FAN24G2899 Fragaria x ananassa
FAN27G0763 Fragaria x ananassa
FvH4_2g12680 Fragaria vesca
FvH4_6g22940 Fragaria vesca
FvH4_6g22950 Fragaria vesca
FvH4_6g23390 Fragaria vesca
Glyma.10G219500 Glycine max
Glyma.20G172200 Glycine max
Gohir.A05G247600 Gossypium hirsutum
Gohir.A06G110700 Gossypium hirsutum
Gohir.D05G249100 Gossypium hirsutum
Gohir.D06G114601 Gossypium hirsutum
Gorai.009G260200 Gossypium raimondii
Gorai.010G131000 Gossypium raimondii
GSVIVG01013670001 Vitis vinifera
HanXRQChr02g0041241 Helianthus annuus
Haze_17848 Corylus avellana
Hma1.2p1_0276F.1_g111070 Hydrangea macrophylla
HPP92_019129 Vanilla planifolia
HPP92_019141 Vanilla planifolia
HPP92_028244 Vanilla planifolia
Hund17505 Selenicereus undatus
Lalb_Chr02g0141671 Lupinus albus
Lalb_Chr06g0161861 Lupinus albus
Lj5g0009681 Lotus japonicus
Lj7A387T76 Lonicera japonica
Lj7A387T77 Lonicera japonica
Lsat_1_v5_gn_1_5420 Lactuca sativa
Manes.02G186700 Manihot esculenta
Mapoly0070s0034 Marchantia polymorpha
MBI17_g21480_MAGBIO Magnolia biondii
MCO06G063 Micromonas commoda
MD05G1034500 Malus domestica
MD05G1038100 Malus domestica
MD10G1041800 Malus domestica
Medtr1g097280 Medicago truncatula
MELO3C019953.2 Cucumis melo
Migut.N01203 Erythranthe guttata
MSTRG.21597 Avicennia marina
MSTRG.2878 Avicennia marina
Nitab4.5_0001207g0010 Nicotiana tabacum
Nitab4.5_0003229g0020 Nicotiana tabacum
Oeu025253.2 Olea europaea
Oeu046919.1 Olea europaea
Os06g0248200 Oryza sativa ssp. japonica
Os06g0698400 Oryza sativa ssp. japonica
Os11g0176100 Oryza sativa ssp. japonica
Peaxi162Scf00089g01727 Petunia axillaris
Peaxi162Scf00415g00043 Petunia axillaris
PGR042G2606 Punica granatum
PGSC0003DMG400010340 Solanum tuberosum
PGSC0003DMG400012892 Solanum tuberosum
Phvul.007G085700 Phaseolus vulgaris
Potri.002G061200 Populus trichocarpa
Pp3c14_13370 Physcomitrium patens
Pp3c25_6210 Physcomitrium patens
PRCOL_00002013 Prasinoderma coloniale
Prupe.8G045900 Prunus persica
Psat2g126360 Pisum sativum
Psat5g034120 Pisum sativum
Psat6g189240 Pisum sativum
PSO170G4898 Papaver somniferum
PSO210G1751 Papaver somniferum
PSO339G2267 Papaver somniferum
PSO339G5784 Papaver somniferum
QL02p035395 Quercus lobata
RcHm_v2.0_Chr3g0481441 Rosa chinensis
RcHm_v2.0_Chr6g0273401 Rosa chinensis
Rhsim11G0089600 Rhododendron simsii
Sabra02G0049600 Salix brachista
SalBow4G1869 Salvia bowleyana
SalBow8G2839 Salvia bowleyana
Sc03g0006210 Simmondsia chinensis
Sed0021776 Sechium edule
Sed0023525 Sechium edule
SGA_v2.0_scaffold112G31597 Striga asiatica
SGA_v2.0_scaffold31G12772 Striga asiatica
SGA_v2.0_scaffold47G17607 Striga asiatica
SHI09143 Sapria himalayana
SMO147G0245 Selaginella moellendorffii
Solyc02g069160.3 Solanum lycopersicum
Solyc09g065080.2 Solanum lycopersicum
Solyc09g065090.2 Solanum lycopersicum
Sopen02g018290 Solanum pennellii
Sopen09g026800 Solanum pennellii
Sp5g26830 Schrenkiella parvula
SpUn0020_0140 Schrenkiella parvula
TAR625G1274 Trochodendron aralioides
TAR628G0751 Trochodendron aralioides
THA.LOC104800099 Tarenaya hassleriana
THA.LOC104800222 Tarenaya hassleriana
Thecc.08G196800 Theobroma cacao
Thhalv10018490m.g Eutrema salsugineum
TPR.G23156 Trifolium pratense
TWI34G1000 Tripterygium wilfordii
TWI60G1440 Tripterygium wilfordii
unitig_748.g8757 Utricularia gibba
vmacro01509 Vaccinium macrocarpon
VMungo0720G1722 Vigna mungo
Zm00001eb091530 Zea mays
Zm00001eb201080 Zea mays

User provided reference genes

Program Settings