Gene: GSVIVG01013670001
General Information
Structural Information
- Species Vitis vinifera
- Gene Identifier GSVIVG01013670001
- Transcript Identifier GSVIVT01013670001
- Gene Type Coding gene
- Location chr18_random : 2308631-2332526 : negative
Gene Family Information
- ID HOM05D004266
- #Genes/#Species 166/96
- Phylogenetic origin
- ID ORTHO05D005151
- #Genes/#Species 163/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id GSVIVG01013670001.Genoscope12X
- pacid 17824871
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0031124 | IEA | InterPro | mRNA 3'-end processing | |
GO:0042868 | ISO | PLAZA Integrative Orthology | antisense RNA metabolic process | AT1G71800 |
GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT1G71800 |
GO:0031123 | ISO | PLAZA Integrative Orthology | RNA 3'-end processing | AT1G71800 |
GO:0031047 | ISO | PLAZA Integrative Orthology | gene silencing by RNA | AT1G71800 |
GO:0048589 | ISO | PLAZA Integrative Orthology | developmental growth | AT1G71800 |
GO:0060968 | ISO | PLAZA Integrative Orthology | regulation of gene silencing | AT1G71800 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G71800 |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G71800 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR038192 | Transcription termination and cleavage factor, C-terminal domain superfamily |
IPR026896 | Transcription termination and cleavage factor, C-terminal domain |
IPR000504 | RNA recognition motif domain |
IPR025742 | Cleavage stimulation factor subunit 2, hinge domain |
IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
IPR035979 | RNA-binding domain superfamily |
Mapman id | Description |
---|---|
16.3.1.3.2 | RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage Stimulatory Factor (CstF) complex.component CstF64/Rna15 |