Gene: TPR.G23156

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G23156
  • Transcript Identifier TPR.T23947
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_scaf_986 : 39565-45575 : positive

Gene Family Information

  • ID HOM05D004266
  • #Genes/#Species 166/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA23947.v2
  • id Tp57577_TGAC_v2_gene23156.v2
  • pacid 35952253

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031124
IEA
InterPromRNA 3'-end processing
GO:0042868
ISO
PLAZA Integrative Orthologyantisense RNA metabolic process AT1G71800
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT1G71800
GO:0031123
ISO
PLAZA Integrative OrthologyRNA 3'-end processing AT1G71800
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA AT1G71800
GO:0048589
ISO
PLAZA Integrative Orthologydevelopmental growth AT1G71800
GO:0060968
ISO
PLAZA Integrative Orthologyregulation of gene silencing AT1G71800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G71800
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G71800

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR026896 Transcription termination and cleavage factor, C-terminal domain
IPR025742 Cleavage stimulation factor subunit 2, hinge domain
IPR038192 Transcription termination and cleavage factor, C-terminal domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.3.1.3.2 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage Stimulatory Factor (CstF) complex.component CstF64/Rna15