Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p33110 Brassica napus
Aa31LG8G15860 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3104 Anthoceros agrestis
Actinidia21860 Actinidia chinensis
AL3G53200 Arabidopsis lyrata
AL7G21820 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.341EN6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G8BNVQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QJ4IDW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z89DQ4 Arachis hypogaea
AT2G18740 Arabidopsis thaliana
AT4G30330 Arabidopsis thaliana
ATR0580G403 Amborella trichopoda
ATR0763G200 Amborella trichopoda
Atru.chr12.835 Acer truncatum
Atru.chr7.568 Acer truncatum
AUR62003643 Chenopodium quinoa
AUR62017953 Chenopodium quinoa
AUR62038785 Chenopodium quinoa
BcaB03g16666 Brassica carinata
BcaB08g34822 Brassica carinata
BcaC04g22886 Brassica carinata
BcaC06g36458 Brassica carinata
BolC3t18199H Brassica oleracea
BolC7t40790H Brassica oleracea
BolC9t54322H Brassica oleracea
BraA06t26241Z Brassica rapa
C03p59350 Brassica napus
CAN.G929.30 Capsicum annuum
CANSAT11G1348 Cannabis sativa
CARHR109330 Cardamine hirsuta
Carub.0003s3301 Capsella rubella
Carub.0005s1251 Capsella rubella
Carub.0007s1027 Capsella rubella
Ca_06194_v3 Cicer arietinum L.
Cc04_g00460 Coffea canephora
CDE01G0803 Ceratophyllum demersum
CDE12G0561 Ceratophyllum demersum
Cfa004375 Carpinus fangiana
Ciclev10010045m.g Citrus clementina
Ciclev10027494m.g Citrus clementina
CiPaw.07G188400 Carya illinoinensis
CiPaw.08G038400 Carya illinoinensis
ClCG06G013040 Citrullus lanatus
ClCG09G010690 Citrullus lanatus
COL.COLO4_22865 Corchorus olitorius
Cpa.g.sc126.37 Carica papaya
Cre08.g385200 Chlamydomonas reinhardtii
CsaV3_1G031190 Cucumis sativus L.
CsaV3_7G021700 Cucumis sativus L.
CSS0025026 Camellia sinensis var. sinensis
CSS0040204 Camellia sinensis var. sinensis
CSS0040441 Camellia sinensis var. sinensis
DCAR_014711 Daucus carota
DCAR_017954 Daucus carota
Dinv37803 Davidia involucrata
Dinv42765 Davidia involucrata
Dinv43338 Davidia involucrata
Duzib150G0286 Durio zibethinus
Duzib168G1637 Durio zibethinus
ECA234G0975 Erigeron canadensis
EL10Ac6g15226 Beta vulgaris
Eucgr.J03147 Eucalyptus grandis
Eucgr.L02749 Eucalyptus grandis
FAN01G2196 Fragaria x ananassa
FAN06G0337 Fragaria x ananassa
FAN07G1806 Fragaria x ananassa
FAN10G2139 Fragaria x ananassa
FAN12G1866 Fragaria x ananassa
FAN17G0034 Fragaria x ananassa
FAN22G0545 Fragaria x ananassa
FvH4_4g08420 Fragaria vesca
FvH4_7g02280 Fragaria vesca
Glyma.04G208600 Glycine max
Glyma.06G157100 Glycine max
Glyma.13G093400 Glycine max
Glyma.17G067100 Glycine max
Gohir.A08G234900 Gossypium hirsutum
Gohir.D08G255300 Gossypium hirsutum
Gorai.004G272400 Gossypium raimondii
GSVIVG01008301001 Vitis vinifera
HanXRQChr10g0311551 Helianthus annuus
Hma1.2p1_1104F.1_g257440 Hydrangea macrophylla
Hma1.2p1_1261F.1_g271100 Hydrangea macrophylla
HPP92_018528 Vanilla planifolia
Hund03511 Selenicereus undatus
Hund19625 Selenicereus undatus
Lalb_Chr07g0180191 Lupinus albus
Lalb_Chr12g0199151 Lupinus albus
Lalb_Chr13g0300421 Lupinus albus
Lj4A922T54 Lonicera japonica
Lj4g0002134 Lotus japonicus
Lj5g0004975 Lotus japonicus
Lsat_1_v5_gn_1_39580 Lactuca sativa
Lsat_1_v5_gn_5_137520 Lactuca sativa
Manes.05G188200 Manihot esculenta
Manes.06G037450 Manihot esculenta
Manes.08G085100 Manihot esculenta
Mapoly0127s0039 Marchantia polymorpha
MBI08_g10604_MAGBIO Magnolia biondii
MBI14_g26429_MAGBIO Magnolia biondii
MBI16_g00671_MAGBIO Magnolia biondii
MCO12G107 Micromonas commoda
MD13G1262900 Malus domestica
Medtr2g104440 Medicago truncatula
Medtr5g072530 Medicago truncatula
MELO3C013179.2 Cucumis melo
MELO3C017504.2 Cucumis melo
Migut.D00898 Erythranthe guttata
Migut.J01787 Erythranthe guttata
MSTRG.19883 Avicennia marina
MSTRG.26107 Avicennia marina
MSTRG.6452 Avicennia marina
Nitab4.5_0000033g0430 Nicotiana tabacum
Nitab4.5_0000782g0190 Nicotiana tabacum
Nitab4.5_0001678g0020 Nicotiana tabacum
Nitab4.5_0004612g0030 Nicotiana tabacum
Nitab4.5_0005074g0050 Nicotiana tabacum
Nn2g14329 Nelumbo nucifera
Oeu004017.1 Olea europaea
Os02g0126700 Oryza sativa ssp. japonica
Os08g0151400 Oryza sativa ssp. japonica
Peaxi162Scf00171g00327 Petunia axillaris
Peaxi162Scf00317g00617 Petunia axillaris
Peaxi162Scf00429g00616 Petunia axillaris
Peaxi162Scf00643g00641 Petunia axillaris
Peaxi162Scf47975g00010 Petunia axillaris
PGR044G2568 Punica granatum
PGSC0003DMG400010156 Solanum tuberosum
PGSC0003DMG400025548 Solanum tuberosum
PGSC0003DMG400027050 Solanum tuberosum
Phvul.003G149400 Phaseolus vulgaris
Phvul.009G153200 Phaseolus vulgaris
Potri.006G174000 Populus trichocarpa
Potri.018G096200 Populus trichocarpa
Pp3c14_15210 Physcomitrium patens
Pp3c17_6070 Physcomitrium patens
Pp3c2_10270 Physcomitrium patens
PRCOL_00004725 Prasinoderma coloniale
Prupe.1G094500 Prunus persica
Prupe.1G136300 Prunus persica
Prupe.4G278600 Prunus persica
Psat6g004960 Pisum sativum
Psat6g005000 Pisum sativum
Psat6g014800 Pisum sativum
Psat6g015920 Pisum sativum
Psat6g139240 Pisum sativum
PSO063G7604 Papaver somniferum
PSO170G2534 Papaver somniferum
PSO782G1667 Papaver somniferum
PSO782G3457 Papaver somniferum
QL02p096594 Quercus lobata
QL08p040368 Quercus lobata
RcHm_v2.0_Chr1g0319581 Rosa chinensis
RcHm_v2.0_Chr4g0403921 Rosa chinensis
Rhsim08G0246800 Rhododendron simsii
Rhsim12G0214100 Rhododendron simsii
Sabra06G0133600 Salix brachista
Sabra18G0083100 Salix brachista
Sc03g0004630 Simmondsia chinensis
Sed0017254 Sechium edule
Sed0019676 Sechium edule
SHI02961 Sapria himalayana
SMO347G0208 Selaginella moellendorffii
Solyc03g098470.3 Solanum lycopersicum
Solyc06g072280.3 Solanum lycopersicum
Sopen03g029210 Solanum pennellii
Sopen06g028650 Solanum pennellii
Sp3g32240 Schrenkiella parvula
Sp7g28200 Schrenkiella parvula
TAR383G1055 Trochodendron aralioides
TAR626G0766 Trochodendron aralioides
TAR636G2407 Trochodendron aralioides
THA.LOC104803508 Tarenaya hassleriana
THA.LOC104803931 Tarenaya hassleriana
Thecc.06G016400 Theobroma cacao
Thecc.09G164300 Theobroma cacao
Thhalv10022941m.g Eutrema salsugineum
Thhalv10026682m.g Eutrema salsugineum
TPR.G19006 Trifolium pratense
TPR.G34745 Trifolium pratense
TWI15G0209 Tripterygium wilfordii
TWI60G1574 Tripterygium wilfordii
TWI63G0474 Tripterygium wilfordii
unitig_37.g12145 Utricularia gibba
unitig_92.g28119 Utricularia gibba
vmacro08527 Vaccinium macrocarpon
vmacro17063 Vaccinium macrocarpon
vmacro18702 Vaccinium macrocarpon
Zm00001eb120030 Zea mays
Zm00001eb132910 Zea mays
Zm00001eb338420 Zea mays
Zm00001eb387950 Zea mays
Zm00001eb410720 Zea mays

User provided reference genes

Program Settings