Gene: Zm00001eb410720
General Information
Structural Information
- Species Zea mays
- Gene Identifier Zm00001eb410720
- Transcript Identifier Zm00001eb410720_T001
- Gene Type Coding gene
- Location 10 : 26886403-26886948 : positive
Gene Family Information
- ID HOM05D003522
- #Genes/#Species 194/92
- Phylogenetic origin
- ID ORTHO05D003993
- #Genes/#Species 195/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Zm00001eb410720_T001
- pid Zm00001eb410720_P001
- uniprot A0A3L6GC05
- uniprot A0A1D6MFZ6
- uniprot A0A1D6IWR3
- V4_identifier Zm00001d023900
Descriptions
- Description Zm00001e039734
- Description Small nuclear ribonucleoprotein family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043484 | ISO | PLAZA Integrative Orthology | regulation of RNA splicing | AT2G18740 |
| GO:0048509 | ISO | PLAZA Integrative Orthology | regulation of meristem development | AT2G18740 |
| GO:0008380 | ISO | PLAZA Integrative Orthology | RNA splicing | AT2G18740 |
| GO:0000398 | IEA | GOA Database | mRNA splicing, via spliceosome | |
| GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome | |
| GO:0000387 | IBA | GOA Database | spliceosomal snRNP assembly |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G18740 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT2G18740 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G18740 |
| GO:0005681 | IEA | GOA Database | spliceosomal complex | |
| GO:0005681 | IEA | InterPro | spliceosomal complex | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005682 | IBA | GOA Database | U5 snRNP | |
| GO:0005685 | IBA | GOA Database | U1 snRNP | |
| GO:0005686 | IBA | GOA Database | U2 snRNP | |
| GO:0005687 | IBA | GOA Database | U4 snRNP | |
| GO:0046540 | IBA | GOA Database | U4/U6 x U5 tri-snRNP complex | |
| GO:0071011 | IBA | GOA Database | precatalytic spliceosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027078 | Small nuclear ribonucleoprotein E |
| Mapman id | Description |
|---|---|
| 16.2.2.5 | RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-E |