Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p05280 Brassica napus
A09p63570 Brassica napus
Aa31LG1G180 Aethionema arabicum
Aa31LG1G190 Aethionema arabicum
Aa31LG1G200 Aethionema arabicum
Aa31LG2G19310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.389 Anthoceros agrestis
Actinidia07230 Actinidia chinensis
Ah.08g215940 Amaranthus hybridus
Ah.08g215950 Amaranthus hybridus
AL1G18660 Arabidopsis lyrata
AL4G20650 Arabidopsis lyrata
AL4G20810 Arabidopsis lyrata
Aqoxy16s008 Aquilegia oxysepala
Aqoxy2G01337 Aquilegia oxysepala
Aqoxy3G01424 Aquilegia oxysepala
Aqoxy4G01245 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.183PB6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1QTR5T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.505PCM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5H8JFW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.98W5WM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B0S4UE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B2Y78K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F25EMM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GG4XIK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JQS2KP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U78W58 Arachis hypogaea
AT1G08260 Arabidopsis thaliana
AT2G27120 Arabidopsis thaliana
ATR0820G074 Amborella trichopoda
ATR0820G092 Amborella trichopoda
Atru.chr3.3336 Acer truncatum
AUR62009793 Chenopodium quinoa
AUR62039240 Chenopodium quinoa
BcaB03g13343 Brassica carinata
BcaB07g34067 Brassica carinata
BcaC07g41675 Brassica carinata
BolC5t29391H Brassica oleracea
BolC5t29400H Brassica oleracea
BolC5t29401H Brassica oleracea
BraA06t23736Z Brassica rapa
C05p06350 Brassica napus
CAN.G1177.10 Capsicum annuum
CAN.G1177.9 Capsicum annuum
CAN.G644.7 Capsicum annuum
CANSAT25G1376 Cannabis sativa
CANSAT54G1671 Cannabis sativa
CARHR008100 Cardamine hirsuta
CARHR038400 Cardamine hirsuta
CARHR038410 Cardamine hirsuta
CARHR055740 Cardamine hirsuta
CARHR055750 Cardamine hirsuta
Carub.0001s0761 Capsella rubella
Ca_19261_v3 Cicer arietinum L.
CBR_g8395 Chara braunii
CBR_g8396 Chara braunii
Cc01_g09530 Coffea canephora
CDE02G3060 Ceratophyllum demersum
CDE02G3272 Ceratophyllum demersum
CDE02G3768 Ceratophyllum demersum
Cfa019187 Carpinus fangiana
Cfa025881 Carpinus fangiana
Ciclev10027662m.g Citrus clementina
CiPaw.13G138800 Carya illinoinensis
CiPaw.13G138900 Carya illinoinensis
ClCG02G022050 Citrullus lanatus
ClCG09G020580 Citrullus lanatus
ClCG09G020590 Citrullus lanatus
COL.COLO4_06999 Corchorus olitorius
COL.COLO4_19937 Corchorus olitorius
Cpa.g.sc32.131 Carica papaya
Cpa.g.sc32.132 Carica papaya
Cpa.g.sc32.133 Carica papaya
Cpa.g.sc32.135 Carica papaya
Cre03.g179961 Chlamydomonas reinhardtii
CsaV3_6G014890 Cucumis sativus L.
CSS0049320 Camellia sinensis var. sinensis
DCAR_012181 Daucus carota
DCAR_017672 Daucus carota
Dinv42575 Davidia involucrata
Duzib168G1226 Durio zibethinus
ECA233G3796 Erigeron canadensis
ECA238G2640 Erigeron canadensis
ECA238G3330 Erigeron canadensis
ECA246G0879 Erigeron canadensis
EL10Ac7g15792 Beta vulgaris
Eucgr.B03882 Eucalyptus grandis
FAN11G3202 Fragaria x ananassa
FAN16G3075 Fragaria x ananassa
FAN21G1989 Fragaria x ananassa
FAN25G3673 Fragaria x ananassa
FvH4_3g29570 Fragaria vesca
Glyma.11G237700 Glycine max
Glyma.12G087000 Glycine max
Glyma.13G033700 Glycine max
Glyma.18G157402 Glycine max
Gohir.A05G082500 Gossypium hirsutum
Gohir.D02G140050 Gossypium hirsutum
Gohir.D05G085400 Gossypium hirsutum
Gohir.D05G085450 Gossypium hirsutum
Gorai.005G156700 Gossypium raimondii
Gorai.009G087200 Gossypium raimondii
GSVIVG01031365001 Vitis vinifera
HanXRQChr05g0145141 Helianthus annuus
HanXRQChr09g0249461 Helianthus annuus
HanXRQChr09g0249471 Helianthus annuus
HanXRQChr09g0249481 Helianthus annuus
Haze_23425 Corylus avellana
Hma1.2p1_0305F.1_g119455 Hydrangea macrophylla
HPP92_025207 Vanilla planifolia
HPP92_025208 Vanilla planifolia
HPP92_025278 Vanilla planifolia
Hund20868 Selenicereus undatus
Lalb_Chr19g0136661 Lupinus albus
Lj2C988G5 Lonicera japonica
Lj3g0000987 Lotus japonicus
Lsat_1_v5_gn_6_39380 Lactuca sativa
Lsat_1_v5_gn_6_39840 Lactuca sativa
Lsat_1_v5_gn_8_25040 Lactuca sativa
Manes.04G006100 Manihot esculenta
Mapoly0006s0290 Marchantia polymorpha
MBI06_g01164_MAGBIO Magnolia biondii
MBI06_g41845_MAGBIO Magnolia biondii
MBI12_g02803_MAGBIO Magnolia biondii
MBI15_g14875_MAGBIO Magnolia biondii
MBI15_g40424_MAGBIO Magnolia biondii
MBI15_g40425_MAGBIO Magnolia biondii
MBI18_g03519_MAGBIO Magnolia biondii
MBI18_g36125_MAGBIO Magnolia biondii
MCO02G508 Micromonas commoda
MD03G1139200 Malus domestica
MD11G1160700 Malus domestica
Medtr4g054980 Medicago truncatula
MELO3C002892.2 Cucumis melo
MELO3C021434.2 Cucumis melo
MELO3C024923.2 Cucumis melo
MELO3C033806.2 Cucumis melo
Migut.N02501 Erythranthe guttata
MSTRG.17714 Avicennia marina
Nitab4.5_0003532g0020 Nicotiana tabacum
Nitab4.5_0003532g0030 Nicotiana tabacum
Nitab4.5_0003532g0040 Nicotiana tabacum
Nitab4.5_0003532g0050 Nicotiana tabacum
Nitab4.5_0004240g0010 Nicotiana tabacum
Nitab4.5_0004240g0020 Nicotiana tabacum
Nitab4.5_0004240g0030 Nicotiana tabacum
Nitab4.5_0004240g0050 Nicotiana tabacum
Nn2g14071 Nelumbo nucifera
Oeu031488.2 Olea europaea
Os02g0511900 Oryza sativa ssp. japonica
Os02g0511901 Oryza sativa ssp. japonica
Peaxi162Scf00544g00915 Petunia axillaris
Peaxi162Scf00544g00919 Petunia axillaris
Peaxi162Scf00544g00920 Petunia axillaris
Peaxi162Scf00544g00922 Petunia axillaris
PGR102G2277 Punica granatum
Phvul.003G000400 Phaseolus vulgaris
Phvul.006G055950 Phaseolus vulgaris
Phvul.011G091900 Phaseolus vulgaris
Potri.004G185700 Populus trichocarpa
Pp3c13_4500 Physcomitrium patens
Pp3c18_14020 Physcomitrium patens
PRCOL_00004747 Prasinoderma coloniale
Prupe.6G124200 Prunus persica
Psat7g153200 Pisum sativum
Psat7g189880 Pisum sativum
PSO384G0460 Papaver somniferum
PSO425G0048 Papaver somniferum
PSO782G5595 Papaver somniferum
QL01p013239 Quercus lobata
QL02p000117 Quercus lobata
QL02p000127 Quercus lobata
QL02p053680 Quercus lobata
RcHm_v2.0_Chr5g0054631 Rosa chinensis
RcHm_v2.0_Chr5g0054881 Rosa chinensis
Rhsim05G0032400 Rhododendron simsii
Rhsim13G0107600 Rhododendron simsii
Sabra04G0125000 Salix brachista
SalBow3G0618 Salvia bowleyana
Sc21g0007220 Simmondsia chinensis
Sed0008797 Sechium edule
SEGI_12002 Sequoiadendron giganteum
SEGI_20214 Sequoiadendron giganteum
SEGI_26591 Sequoiadendron giganteum
SGA_v2.0_scaffold102G29919 Striga asiatica
SGA_v2.0_scaffold424G51466 Striga asiatica
SGA_v2.0_scaffold424G51468 Striga asiatica
SHI18830 Sapria himalayana
SMO144G0205 Selaginella moellendorffii
Solyc11g067110.2 Solanum lycopersicum
Solyc11g067140.2 Solanum lycopersicum
Sopen11g026820 Solanum pennellii
Sp1g06890 Schrenkiella parvula
TAR636G3131 Trochodendron aralioides
THA.LOC104826411 Tarenaya hassleriana
Thecc.09G288000 Theobroma cacao
Thhalv10006524m.g Eutrema salsugineum
TPR.G15595 Trifolium pratense
TPR.G328 Trifolium pratense
TPR.G35944 Trifolium pratense
unitig_22.g6642 Utricularia gibba
vmacro03295 Vaccinium macrocarpon
VMungo1127G1826 Vigna mungo
Zm00001eb135070 Zea mays
Zm00001eb147670 Zea mays
Zm00001eb179700 Zea mays
Zm00001eb241860 Zea mays

User provided reference genes

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