Gene: Carub.0001s0761

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s0761
  • Transcript Identifier Carub.0001s0761.1
  • Gene Type Coding gene
  • Location scaffold_1 : 2668619-2683935 : positive

Gene Family Information

  • ID HOM05D003289
  • #Genes/#Species 208/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s0761.v1.1
  • pacid 39228777
  • synonym Carubv10008067m.g

Descriptions

  • Description K02324 - DNA polymerase epsilon subunit 1 (POLE1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
IEA
InterProDNA replication
GO:0006281
IEA
InterProDNA repair
GO:0010086
ISO
PLAZA Integrative Orthologyembryonic root morphogenesis AT1G08260
GO:0051302
ISO
PLAZA Integrative Orthologyregulation of cell division AT1G08260
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G08260
GO:0048579
ISO
PLAZA Integrative Orthologynegative regulation of long-day photoperiodism, flowering AT1G08260

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003887
IEA
InterProDNA-directed DNA polymerase activity
GO:0008270
IEA
InterProzinc ion binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003677
IEA
InterProDNA binding
GO:0000166
IEA
InterPronucleotide binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G08260

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0008622
IEA
InterProepsilon DNA polymerase complex
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT1G08260

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023211 DNA polymerase, palm domain superfamily
IPR013697 DNA polymerase epsilon, catalytic subunit A, C-terminal
IPR043502 DNA/RNA polymerase superfamily
IPR036397 Ribonuclease H superfamily
IPR012337 Ribonuclease H-like superfamily
IPR029703 DNA polymerase epsilon catalytic subunit
IPR042087 DNA polymerase family B, thumb domain
IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain
IPR006172 DNA-directed DNA polymerase, family B
IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain
Mapman id Description
13.2.3.3.1 Cell cycle organisation.DNA replication.elongation.DNA polymerase epsilon complex.catalytic component POL2/POLE1