Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p30920 Brassica napus
Aa31LG1G17700 Aethionema arabicum
Aa31LG3G17620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.1293 Anthoceros agrestis
Actinidia00266 Actinidia chinensis
Actinidia10317 Actinidia chinensis
Actinidia29589 Actinidia chinensis
Actinidia30767 Actinidia chinensis
Actinidia33133 Actinidia chinensis
Actinidia33134 Actinidia chinensis
AL372U10010 Arabidopsis lyrata
AL8G41470 Arabidopsis lyrata
Aqoxy5G01894 Aquilegia oxysepala
Aqoxy6G00798 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DEZ300 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KE9LK4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SG9G15 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V5MEW2 Arachis hypogaea
AT5G64200 Arabidopsis thaliana
ATR0118G028 Amborella trichopoda
ATR0665G311 Amborella trichopoda
Atru.chr13.1199 Acer truncatum
Atru.chr13.1219 Acer truncatum
Atru.chr5.2123 Acer truncatum
AUR62010131 Chenopodium quinoa
AUR62013124 Chenopodium quinoa
AUR62018901 Chenopodium quinoa
AUR62027748 Chenopodium quinoa
AUR62032463 Chenopodium quinoa
AUR62036629 Chenopodium quinoa
BcaB02g09777 Brassica carinata
BcaC01g02677 Brassica carinata
BolC3t18466H Brassica oleracea
BraA06t26031Z Brassica rapa
C03p62050 Brassica napus
CAN.G326.16 Capsicum annuum
CARHR278110 Cardamine hirsuta
Carub.0008s2499 Capsella rubella
Ca_12303_v3 Cicer arietinum L.
Ca_18351_v3 Cicer arietinum L.
CBR_g34604 Chara braunii
Cc02_g21570 Coffea canephora
Cc10_g07270 Coffea canephora
CDE10G0548 Ceratophyllum demersum
CDE10G0834 Ceratophyllum demersum
Cfa013630 Carpinus fangiana
Ciclev10002266m.g Citrus clementina
Ciclev10029102m.g Citrus clementina
CiPaw.05G035800 Carya illinoinensis
CiPaw.06G153100 Carya illinoinensis
CiPaw.07G180500 Carya illinoinensis
CiPaw.08G044700 Carya illinoinensis
ClCG08G011060 Citrullus lanatus
ClCG09G015410 Citrullus lanatus
COL.COLO4_24953 Corchorus olitorius
Cpa.g.sc2511.2 Carica papaya
CsaV3_2G024240 Cucumis sativus L.
CsaV3_7G006480 Cucumis sativus L.
CSS0006291 Camellia sinensis var. sinensis
CSS0011997 Camellia sinensis var. sinensis
CSS0024435 Camellia sinensis var. sinensis
DCAR_001787 Daucus carota
DCAR_008733 Daucus carota
Dinv09033 Davidia involucrata
Dinv14322 Davidia involucrata
Dinv24193 Davidia involucrata
Dinv44769 Davidia involucrata
Duzib248G1348 Durio zibethinus
ECA232G1728 Erigeron canadensis
ECA246G2989 Erigeron canadensis
EL10Ac1g01229 Beta vulgaris
EL10Ac9g21475 Beta vulgaris
Eucgr.F00318 Eucalyptus grandis
Eucgr.G00770 Eucalyptus grandis
FAN02G4093 Fragaria x ananassa
FAN04G2506 Fragaria x ananassa
FAN08G1579 Fragaria x ananassa
FAN09G3585 Fragaria x ananassa
FAN13G2489 Fragaria x ananassa
FAN14G0240 Fragaria x ananassa
FAN14G0471 Fragaria x ananassa
FAN18G2837 Fragaria x ananassa
FvH4_5g37470 Fragaria vesca
FvH4_6g21680 Fragaria vesca
Glyma.05G117600 Glycine max
Glyma.08G072600 Glycine max
Gohir.A03G173800 Gossypium hirsutum
Gohir.A04G113400 Gossypium hirsutum
Gohir.A13G067100 Gossypium hirsutum
Gohir.D02G196900 Gossypium hirsutum
Gohir.D04G154700 Gossypium hirsutum
Gohir.D13G054500 Gossypium hirsutum
Gorai.005G220000 Gossypium raimondii
Gorai.012G141900 Gossypium raimondii
Gorai.013G061300 Gossypium raimondii
GSVIVG01009023001 Vitis vinifera
GSVIVG01038734001 Vitis vinifera
HanXRQChr05g0147361 Helianthus annuus
HanXRQChr08g0231641 Helianthus annuus
HanXRQChr15g0491911 Helianthus annuus
Haze_10693 Corylus avellana
Haze_10695 Corylus avellana
Hma1.2p1_0237F.1_g099420 Hydrangea macrophylla
HPP92_027250 Vanilla planifolia
Hund00061 Selenicereus undatus
Hund16914 Selenicereus undatus
Lalb_Chr04g0256551 Lupinus albus
Lalb_Chr10g0097821 Lupinus albus
Lalb_Chr17g0340171 Lupinus albus
Lj4A103T47 Lonicera japonica
Lj4A722T71 Lonicera japonica
Lj4g0021375 Lotus japonicus
Lj5A239T84 Lonicera japonica
Lsat_1_v5_gn_5_107321 Lactuca sativa
Lsat_1_v5_gn_5_114801 Lactuca sativa
Lsat_1_v5_gn_6_102981 Lactuca sativa
Lsat_1_v5_gn_9_41561 Lactuca sativa
Manes.06G012550 Manihot esculenta
Manes.14G165400 Manihot esculenta
Mapoly0007s0152 Marchantia polymorpha
Mapoly0024s0018 Marchantia polymorpha
MBI02_g08722_MAGBIO Magnolia biondii
MBI04_g32485_MAGBIO Magnolia biondii
MBI05_g15582_MAGBIO Magnolia biondii
MD08G1182200 Malus domestica
MD14G1052000 Malus domestica
MD15G1367900 Malus domestica
Medtr4g094235 Medicago truncatula
Medtr5g070450 Medicago truncatula
MELO3C011357.2 Cucumis melo
MELO3C018644.2 Cucumis melo
Migut.N02899 Erythranthe guttata
MSTRG.16582 Avicennia marina
MSTRG.22152 Avicennia marina
MSTRG.24461 Avicennia marina
Nitab4.5_0000232g0340 Nicotiana tabacum
Nitab4.5_0002576g0030 Nicotiana tabacum
Nitab4.5_0003858g0090 Nicotiana tabacum
Nitab4.5_0009977g0010 Nicotiana tabacum
Nn1g05346 Nelumbo nucifera
Nn2g15419 Nelumbo nucifera
Nn5g30123 Nelumbo nucifera
Oeu012922.1 Olea europaea
Os03g0388000 Oryza sativa ssp. japonica
Os07g0623300 Oryza sativa ssp. japonica
Peaxi162Scf00001g00126 Petunia axillaris
Peaxi162Scf00041g01416 Petunia axillaris
Peaxi162Scf00152g01021 Petunia axillaris
PGSC0003DMG400017719 Solanum tuberosum
PGSC0003DMG401012560 Solanum tuberosum
Phvul.002G208600 Phaseolus vulgaris
Potri.002G095800 Populus trichocarpa
Potri.003G023800 Populus trichocarpa
Potri.005G165400 Populus trichocarpa
Pp3c11_21430 Physcomitrium patens
Pp3c1_31280 Physcomitrium patens
Pp3c1_31300 Physcomitrium patens
Pp3c7_7590 Physcomitrium patens
PRCOL_00004530 Prasinoderma coloniale
Prupe.1G516100 Prunus persica
Prupe.7G083500 Prunus persica
Psat2g058440 Pisum sativum
Psat7g098320 Pisum sativum
PSO541G3918 Papaver somniferum
PSO781G0066 Papaver somniferum
QL11p020733 Quercus lobata
QL12p036662 Quercus lobata
RcHm_v2.0_Chr3g0478961 Rosa chinensis
RcHm_v2.0_Chr7g0239081 Rosa chinensis
Rhsim05G0106900 Rhododendron simsii
Rhsim06G0083100 Rhododendron simsii
Rhsim07G0202800 Rhododendron simsii
Sabra02G0075500 Salix brachista
Sabra03G0014900 Salix brachista
Sabra05G0124700 Salix brachista
Sc18g0006910 Simmondsia chinensis
Sc23g0000200 Simmondsia chinensis
Sed0004939 Sechium edule
Sed0010987 Sechium edule
Sed0012050 Sechium edule
SEGI_06350 Sequoiadendron giganteum
SEGI_08784 Sequoiadendron giganteum
SEGI_13212 Sequoiadendron giganteum
SEGI_17731 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30078 Striga asiatica
SGA_v2.0_scaffold18G08404 Striga asiatica
SHI16513 Sapria himalayana
SHI16514 Sapria himalayana
SMO276G0012 Selaginella moellendorffii
SMO347G0267 Selaginella moellendorffii
Solyc01g105140.3 Solanum lycopersicum
Solyc04g074040.3 Solanum lycopersicum
Sopen01g047670 Solanum pennellii
Sopen04g029250 Solanum pennellii
Sp2g27260 Schrenkiella parvula
TAR376G1130 Trochodendron aralioides
TAR625G1537 Trochodendron aralioides
TAR628G0714 Trochodendron aralioides
Thecc.02G138900 Theobroma cacao
Thhalv10004709m.g Eutrema salsugineum
TPR.G10450 Trifolium pratense
TPR.G21121 Trifolium pratense
TPR.G35053 Trifolium pratense
vmacro19930 Vaccinium macrocarpon
vmacro21279 Vaccinium macrocarpon
Zm00001eb018860 Zea mays
Zm00001eb033600 Zea mays
Zm00001eb109680 Zea mays
Zm00001eb199160 Zea mays
Zm00001eb327870 Zea mays

User provided reference genes

Program Settings