Gene: Solyc01g105140.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g105140.3
  • Transcript Identifier Solyc01g105140.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 85714578-85719809 : negative

Gene Family Information

  • ID HOM05D003264
  • #Genes/#Species 210/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g105140.3.1
  • uniprot A0A3Q7ER32
  • gene_id Solyc01g105140

Descriptions

  • Description Arginine/serine-rich splicing factor, putative, expressed (AHRD V3.3 *-* Q6AVF4_ORYSJ)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IBA
GOA DatabasemRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IBA
IEA
GOA DatabaseRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G64200

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
IBA
GOA Databasenuclear speck
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G64200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR003954 RNA recognition motif domain, eukaryote
Mapman id Description
35.1 not assigned.annotated