Gene: Carub.0008s2499

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s2499
  • Transcript Identifier Carub.0008s2499.1
  • Gene Type Coding gene
  • Location scaffold_8 : 12049026-12050827 : negative

Gene Family Information

  • ID HOM05D003264
  • #Genes/#Species 210/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s2499.v1.1
  • pacid 39251344
  • synonym Carubv10026844m.g

Descriptions

  • Description K12891 - splicing factor, arginine/serine-rich 2 (SFRS2)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT5G64200

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G64200

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT5G64200
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G64200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR003954 RNA recognition motif domain, eukaryote
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated