Gene: Thecc.02G138900

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.02G138900
  • Transcript Identifier Thecc.02G138900.1
  • Gene Type Coding gene
  • Location Chromosome_2 : 7420257-7422718 : positive

Gene Family Information

  • ID HOM05D003264
  • #Genes/#Species 210/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.02G138900.v2.1
  • pacid 42033433
  • ancestorIdentifier Thecc1EG007486.CGDv1.1

Descriptions

  • Description Ortholog of human splicing factor SC35
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT5G64200

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G64200

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT5G64200
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G64200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR003954 RNA recognition motif domain, eukaryote
Mapman id Description
35.1 not assigned.annotated