Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p10180 Brassica napus
A09p36620 Brassica napus
Aa31LG1G22590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.692 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.757 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1180 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_59.15 Anthoceros agrestis
Actinidia08911 Actinidia chinensis
Actinidia18296 Actinidia chinensis
Actinidia25515 Actinidia chinensis
Actinidia36844 Actinidia chinensis
Ah.02g114570 Amaranthus hybridus
Ah.11g046940 Amaranthus hybridus
AL149U10010 Arabidopsis lyrata
AL1G43710 Arabidopsis lyrata
AL1G43730 Arabidopsis lyrata
AL5G22970 Arabidopsis lyrata
AL7G10960 Arabidopsis lyrata
Aqoxy1G00627 Aquilegia oxysepala
Aqoxy5G03106 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KQJN8I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MNGJ59 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S5VT7G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y7TDZM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z3WE7L Arachis hypogaea
AT1G29870 Arabidopsis thaliana
AT1G29880 Arabidopsis thaliana
AT3G44740 Arabidopsis thaliana
ATR0706G267 Amborella trichopoda
ATR0807G207 Amborella trichopoda
Atru.chr12.1423 Acer truncatum
AUR62032217 Chenopodium quinoa
AUR62043309 Chenopodium quinoa
AUR62044211 Chenopodium quinoa
BcaB03g12184 Brassica carinata
BcaB03g13853 Brassica carinata
BcaB07g32572 Brassica carinata
BcaC01g00991 Brassica carinata
BcaC05g26999 Brassica carinata
BcaC06g35470 Brassica carinata
BolC3t20961H Brassica oleracea
BolC3t20962H Brassica oleracea
BolC5t31584H Brassica oleracea
BolC7t42060H Brassica oleracea
BraA07t28811Z Brassica rapa
BraA09t39182Z Brassica rapa
C03p86650 Brassica napus
C03p86660 Brassica napus
C05p28620 Brassica napus
C07p15700 Brassica napus
CAN.G843.8 Capsicum annuum
CAN.G849.7 Capsicum annuum
CANSAT11G0290 Cannabis sativa
CARHR029560 Cardamine hirsuta
CARHR152550 Cardamine hirsuta
Carub.0001s2811 Capsella rubella
Carub.0003s2844 Capsella rubella
Carub.0005s1043 Capsella rubella
Carub.0007s0119 Capsella rubella
Carub.0015s0002 Capsella rubella
Ca_14018_v3 Cicer arietinum L.
CBR_g24092 Chara braunii
CBR_g49404 Chara braunii
Cc04_g05830 Coffea canephora
Cc11_g14990 Coffea canephora
CDE08G1318 Ceratophyllum demersum
Cfa009452 Carpinus fangiana
Cfa017019 Carpinus fangiana
Cfa018257 Carpinus fangiana
Cfa024575 Carpinus fangiana
Ciclev10004524m.g Citrus clementina
Ciclev10005363m.g Citrus clementina
CiPaw.05G101000 Carya illinoinensis
ClCG01G020940 Citrullus lanatus
ClCG11G011160 Citrullus lanatus
COL.COLO4_19490 Corchorus olitorius
COL.COLO4_24379 Corchorus olitorius
COL.COLO4_37263 Corchorus olitorius
Cpa.g.c43454 Carica papaya
Cpa.g.sc13.179 Carica papaya
Cpa.g.sc13.180 Carica papaya
Cpa.g.sc182.1 Carica papaya
Cre05.g233800 Chlamydomonas reinhardtii
CsaV3_2G009270 Cucumis sativus L.
CSS0026992 Camellia sinensis var. sinensis
CSS0035484 Camellia sinensis var. sinensis
CSS0036034 Camellia sinensis var. sinensis
DCAR_013876 Daucus carota
DCAR_025646 Daucus carota
Dinv05540 Davidia involucrata
Dinv18154 Davidia involucrata
Dinv21693 Davidia involucrata
Dinv23230 Davidia involucrata
Duzib068G0223 Durio zibethinus
Duzib132G0251 Durio zibethinus
Duzib248G0947 Durio zibethinus
ECA233G1476 Erigeron canadensis
ECA233G3858 Erigeron canadensis
EL10Ac5g11280 Beta vulgaris
EL10Ac8g19668 Beta vulgaris
Eucgr.G01975 Eucalyptus grandis
Eucgr.G02153 Eucalyptus grandis
Eucgr.H04980 Eucalyptus grandis
FAN07G1588 Fragaria x ananassa
FAN12G0467 Fragaria x ananassa
FAN12G2350 Fragaria x ananassa
FAN14G3732 Fragaria x ananassa
FAN17G0004 Fragaria x ananassa
FvH4_4g22441 Fragaria vesca
FvH4_4g22450 Fragaria vesca
FvH4_4g22610 Fragaria vesca
FvH4_6g47230 Fragaria vesca
Glyma.07G206033 Glycine max
Glyma.08G363700 Glycine max
Glyma.18G070000 Glycine max
Glyma.18G298401 Glycine max
Gohir.A04G101600 Gossypium hirsutum
Gohir.D04G140800 Gossypium hirsutum
Gorai.012G125800 Gossypium raimondii
GSVIVG01001092001 Vitis vinifera
GSVIVG01008654001 Vitis vinifera
HanXRQChr09g0256661 Helianthus annuus
HanXRQChr17g0553691 Helianthus annuus
Haze_12505 Corylus avellana
Haze_21183 Corylus avellana
Haze_26207 Corylus avellana
Hma1.2p1_0452F.1_g155970 Hydrangea macrophylla
Hma1.2p1_0787F.1_g217990 Hydrangea macrophylla
HPP92_000327 Vanilla planifolia
HPP92_000359 Vanilla planifolia
HPP92_000360 Vanilla planifolia
HPP92_000361 Vanilla planifolia
HPP92_028069 Vanilla planifolia
Hund02512 Selenicereus undatus
Hund10032 Selenicereus undatus
Lalb_Chr04g0257341 Lupinus albus
Lalb_Chr04g0257351 Lupinus albus
Lalb_Chr17g0335731 Lupinus albus
Lj1g0018511 Lotus japonicus
Lj9A487T49 Lonicera japonica
Lsat_1_v5_gn_2_136020 Lactuca sativa
Lsat_1_v5_gn_8_125780 Lactuca sativa
Lsat_1_v5_gn_8_125800 Lactuca sativa
Lsat_1_v5_gn_8_125820 Lactuca sativa
Manes.08G101000 Manihot esculenta
Manes.09G188200 Manihot esculenta
Mapoly0003s0044 Marchantia polymorpha
MBI10_g32321_MAGBIO Magnolia biondii
MBI10_g44966_MAGBIO Magnolia biondii
MBI10_g44968_MAGBIO Magnolia biondii
MD13G1131000 Malus domestica
MD13G1145800 Malus domestica
MD16G1141200 Malus domestica
Medtr1g112350 Medicago truncatula
Medtr3g006730 Medicago truncatula
Medtr3g006740 Medicago truncatula
Medtr3g106520 Medicago truncatula
Medtr7g406850 Medicago truncatula
MELO3C003905.2 Cucumis melo
Migut.D01180 Erythranthe guttata
Migut.I00670 Erythranthe guttata
MSTRG.9373 Avicennia marina
MSTRG.9374 Avicennia marina
Nitab4.5_0000691g0260 Nicotiana tabacum
Nitab4.5_0000976g0080 Nicotiana tabacum
Nitab4.5_0007955g0020 Nicotiana tabacum
Nitab4.5_0011600g0010 Nicotiana tabacum
Nn3g16268 Nelumbo nucifera
Nn4g22128 Nelumbo nucifera
Oeu043187.1 Olea europaea
Oeu043188.1 Olea europaea
Oeu054157.1 Olea europaea
Os04g0398300 Oryza sativa ssp. japonica
Os08g0538000 Oryza sativa ssp. japonica
Peaxi162Scf00314g00629 Petunia axillaris
Peaxi162Scf00842g00331 Petunia axillaris
PGR119G2030 Punica granatum
PGSC0003DMG400014239 Solanum tuberosum
PGSC0003DMG400015909 Solanum tuberosum
Phvul.008G004200 Phaseolus vulgaris
Potri.001G067800 Populus trichocarpa
Potri.003G162300 Populus trichocarpa
Pp3c6_4010 Physcomitrium patens
PRCOL_00003040 Prasinoderma coloniale
Prupe.1G214600 Prunus persica
Psat3g206520 Pisum sativum
PSO017G7116 Papaver somniferum
PSO541G1746 Papaver somniferum
PSO591G0171 Papaver somniferum
PSO675G4694 Papaver somniferum
PSO801G0712 Papaver somniferum
PSO832G1639 Papaver somniferum
QL08p055697 Quercus lobata
RcHm_v2.0_Chr1g0361881 Rosa chinensis
RcHm_v2.0_Chr4g0428711 Rosa chinensis
RcHm_v2.0_Chr4g0428851 Rosa chinensis
RcHm_v2.0_Chr5g0024621 Rosa chinensis
RcHm_v2.0_Chr6g0269311 Rosa chinensis
RcHm_v2.0_Chr6g0269321 Rosa chinensis
Rhsim08G0198100 Rhododendron simsii
Rhsim12G0181000 Rhododendron simsii
Sabra01G0047100 Salix brachista
Sabra03G0118000 Salix brachista
Sabra15G0127300 Salix brachista
SalBow1G2675 Salvia bowleyana
Sc22g0003310 Simmondsia chinensis
Sed0005865 Sechium edule
Sed0007290 Sechium edule
SEGI_39194 Sequoiadendron giganteum
SGA_v2.0_scaffold168G38551 Striga asiatica
SGA_v2.0_scaffold37G14676 Striga asiatica
SGA_v2.0_scaffold5G02803 Striga asiatica
SHI04113 Sapria himalayana
SMO196G0036 Selaginella moellendorffii
SMO356G0375 Selaginella moellendorffii
Solyc03g118170.3 Solanum lycopersicum
Solyc11g039830.2 Solanum lycopersicum
Sopen03g037090 Solanum pennellii
Sopen11g011720 Solanum pennellii
Sp1g25760 Schrenkiella parvula
Sp1g25770 Schrenkiella parvula
TAR371G0759 Trochodendron aralioides
TAR374G0126 Trochodendron aralioides
TAR374G0792 Trochodendron aralioides
TAR622G0264 Trochodendron aralioides
TAR622G1073 Trochodendron aralioides
THA.LOC104807285 Tarenaya hassleriana
Thecc.02G191900 Theobroma cacao
Thecc.03G141100 Theobroma cacao
Thhalv10006931m.g Eutrema salsugineum
TPR.G25541 Trifolium pratense
TPR.G9721 Trifolium pratense
TWI18G0448 Tripterygium wilfordii
TWI75G1068 Tripterygium wilfordii
unitig_736.g22830 Utricularia gibba
unitig_899.g14822 Utricularia gibba
vmacro16759 Vaccinium macrocarpon
vmacro19189 Vaccinium macrocarpon
VMungo0251G2489 Vigna mungo
VMungo0540G0256 Vigna mungo
VMungo1309G0258 Vigna mungo
VMungo1309G0402 Vigna mungo
VMungo1383G1395 Vigna mungo
Zm00001eb037050 Zea mays
Zm00001eb084770 Zea mays
Zm00001eb126210 Zea mays
Zm00001eb198180 Zea mays

User provided reference genes

Program Settings