Gene: Ah.11g046940
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.11g046940
- Transcript Identifier Ah.11g046940-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_11 : 16631312-16638803 : positive
Gene Family Information
- ID HOM05D002810
- #Genes/#Species 247/99
- Phylogenetic origin
- ID ORTHO05D003983
- #Genes/#Species 196/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Ah.11g046940-v1.1.a1
Descriptions
- Description Glycine--tRNA ligase, mitochondrial 1 (EC 6.1.1.14) (Diadenosine tetraphosphate synthetase) (Ap4A synthetase) (EC 2.7.7.-) (Glycyl-tRNA synthetase 1) (GlyRS-1)
- note Glycine--tRNA ligase, mitochondrial 1 (EC 6.1.1.14) (Diadenosine tetraphosphate synthetase) (Ap4A synthetase) (EC 2.7.7.-) (Glycyl-tRNA synthetase 1) (GlyRS-1)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0006426 | IEA | InterPro | glycyl-tRNA aminoacylation | |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT1G29880 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0004820 | IEA | InterPro | glycine-tRNA ligase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT1G29880 |
| GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT1G29880 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT1G29880 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G29880 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT1G29880 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR009068 | S15/NS1, RNA-binding |
| IPR033731 | Glycyl-tRNA synthetase-like core domain |
| IPR000738 | WHEP-TRS domain |
| IPR002315 | Glycyl-tRNA synthetase |
| IPR004154 | Anticodon-binding |
| IPR002314 | Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) |
| IPR027031 | Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 |
| IPR036621 | Anticodon-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 17.2.9 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.glycine-tRNA ligase |