Gene: AT1G29880

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G29880
  • Transcript Identifier AT1G29880.1
  • Gene Type Coding gene
  • Location Chr1 : 10459662-10462781 : negative

Gene Family Information

  • ID HOM05D002810
  • #Genes/#Species 247/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G29880.1
  • uniprot O23627

Descriptions

  • Description glycyl-tRNA synthetase / glycine-tRNA ligase
  • Computational description glycyl-tRNA synthetase / glycine--tRNA ligase; FUNCTIONS IN: glycine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: response to cadmium ion, glycyl-tRNA aminoacylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Glycyl-tRNA synthetase, alpha2 dimer (InterPro:IPR002315), S15/NS1, RNA-binding (InterPro:IPR009068), Glycyl-tRNA synthetase, alpha2 dimer, C-terminal (InterPro:IPR018160), Anticodon-binding (InterPro:IPR004154), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: tRNA synthetase class II (G, H, P and S) family protein (TAIR:AT1G29870.1); Has 6392 Blast hits to 4464 proteins in 1181 species: Archae - 269; Bacteria - 3324; Metazoa - 242; Fungi - 171; Plants - 75; Viruses - 0; Other Eukaryotes - 2311 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006426
IEA
GOA Databaseglycyl-tRNA aminoacylation
GO:0006426
IBA
Gene Ontologyglycyl-tRNA aminoacylation1
GO:0006426
IEA
InterProglycyl-tRNA aminoacylation
GO:0015966
ISS
Gene Ontologydiadenosine tetraphosphate biosynthetic process
GO:0070150
IBA
Gene Ontologymitochondrial glycyl-tRNA aminoacylation1
GO:0046686
IEP
GOA Databaseresponse to cadmium ion

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0016874
IEA
GOA Databaseligase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0004820
IEA
GOA Databaseglycine-tRNA ligase activity
GO:0004820
ISS, IBA
Gene Ontologyglycine-tRNA ligase activity1
GO:0004820
IEA
InterProglycine-tRNA ligase activity
GO:0046983
ISS
Gene Ontologyprotein dimerization activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005768
IDA
GOA Databaseendosome
GO:0005768
HDA
Gene Ontologyendosome2
GO:0005829
IDA
IEA
GOA Databasecytosol
GO:0005802
IDA
GOA Databasetrans-Golgi network
GO:0005802
HDA
Gene Ontologytrans-Golgi network2
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM, IBA
Gene Ontologycytoplasm1
GO:0005737
IEA
InterProcytoplasm
GO:0005794
IDA
GOA DatabaseGolgi apparatus
GO:0005794
HDA
Gene OntologyGolgi apparatus2
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA
IBA
Gene Ontologymitochondrion1 3
GO:0009507
HDA
Gene Ontologychloroplast4
GO:0005634
HDA
Gene Ontologynucleus5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000738 WHEP-TRS domain
IPR004154 Anticodon-binding
IPR036621 Anticodon-binding domain superfamily
IPR002315 Glycyl-tRNA synthetase
IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
IPR033731 Glycyl-tRNA synthetase-like core domain
IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2
IPR009068 S15/NS1, RNA-binding
Mapman id Description
17.2.9 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glycine-tRNA ligase