Gene: SGA_v2.0_scaffold5G02803
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold5G02803
- Transcript Identifier SGA_v2.0_scaffold5T02803
- Gene Type Coding gene
- Location scaffold5 : 1770224-1778497 : positive
Gene Family Information
- ID HOM05D002810
- #Genes/#Species 247/99
- Phylogenetic origin
- ID ORTHO05D003983
- #Genes/#Species 196/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- product glycyl-tRNA synthetase / glycine--tRNA ligase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006426 | IEA | InterPro | glycyl-tRNA aminoacylation | |
| GO:0006418 | ISO | PLAZA Homology (enrichment) | tRNA aminoacylation for protein translation | HOM05D002810 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT1G29880 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0004820 | IEA | InterPro | glycine-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0004812 | ISO | PLAZA Homology (enrichment) | aminoacyl-tRNA ligase activity | HOM05D002810 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT1G29880 |
| GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT1G29880 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT1G29880 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G29880 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT1G29880 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002315 | Glycyl-tRNA synthetase |
| IPR033731 | Glycyl-tRNA synthetase-like core domain |
| IPR027031 | Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 |
| IPR032867 | DYW domain |
| IPR002885 | Pentatricopeptide repeat |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR004154 | Anticodon-binding |
| IPR036621 | Anticodon-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 17.2.9 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.glycine-tRNA ligase |