Gene: Solyc11g039830.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g039830.2
  • Transcript Identifier Solyc11g039830.2.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 40638807-40645132 : negative

Gene Family Information

  • ID HOM05D002810
  • #Genes/#Species 247/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g039830.2.1
  • uniprot A0A3Q7IV51
  • gene_id Solyc11g039830

Descriptions

  • Description Glycine--tRNA ligase (AHRD V3.3 *** A0A2G2X9C7_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G29880
GO:0006426
IBA
IEA
GOA Databaseglycyl-tRNA aminoacylation
GO:0006426
IEA
InterProglycyl-tRNA aminoacylation
GO:0070150
IBA
GOA Databasemitochondrial glycyl-tRNA aminoacylation
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004820
IBA
IEA
GOA Databaseglycine-tRNA ligase activity
GO:0004820
IEA
InterProglycine-tRNA ligase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016874
IEA
GOA Databaseligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT1G29880
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G29880
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT1G29880
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT1G29880
GO:0005737
IBA
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0005739
IBA
GOA Databasemitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
IPR002315 Glycyl-tRNA synthetase
IPR036621 Anticodon-binding domain superfamily
IPR000738 WHEP-TRS domain
IPR004154 Anticodon-binding
IPR033731 Glycyl-tRNA synthetase-like core domain
IPR009068 S15/NS1, RNA-binding
IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2
Mapman id Description
17.2.9 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glycine-tRNA ligase