Gene: Solyc11g039830.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc11g039830.2
- Transcript Identifier Solyc11g039830.2.1
- Gene Type Coding gene
- Location SL4.0ch11 : 40638807-40645132 : negative
Gene Family Information
- ID HOM05D002810
- #Genes/#Species 247/99
- Phylogenetic origin
- ID ORTHO05D003983
- #Genes/#Species 196/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc11g039830.2.1
- uniprot A0A3Q7IV51
- gene_id Solyc11g039830
Descriptions
- Description Glycine--tRNA ligase (AHRD V3.3 *** A0A2G2X9C7_CAPBA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT1G29880 |
GO:0006426 | IBA IEA | GOA Database | glycyl-tRNA aminoacylation | |
GO:0006426 | IEA | InterPro | glycyl-tRNA aminoacylation | |
GO:0070150 | IBA | GOA Database | mitochondrial glycyl-tRNA aminoacylation | |
GO:0006418 | IEA | GOA Database | tRNA aminoacylation for protein translation | |
GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
GO:0006412 | IEA | GOA Database | translation |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005524 | IEA | GOA Database | ATP binding | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0004820 | IBA IEA | GOA Database | glycine-tRNA ligase activity | |
GO:0004820 | IEA | InterPro | glycine-tRNA ligase activity | |
GO:0000166 | IEA | GOA Database | nucleotide binding | |
GO:0000166 | IEA | InterPro | nucleotide binding | |
GO:0004812 | IEA | GOA Database | aminoacyl-tRNA ligase activity | |
GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
GO:0016740 | IEA | GOA Database | transferase activity | |
GO:0016874 | IEA | GOA Database | ligase activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT1G29880 |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G29880 |
GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT1G29880 |
GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT1G29880 |
GO:0005737 | IBA IEA | GOA Database | cytoplasm | |
GO:0005737 | IEA | InterPro | cytoplasm | |
GO:0005739 | IBA | GOA Database | mitochondrion |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR002314 | Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) |
IPR002315 | Glycyl-tRNA synthetase |
IPR036621 | Anticodon-binding domain superfamily |
IPR000738 | WHEP-TRS domain |
IPR004154 | Anticodon-binding |
IPR033731 | Glycyl-tRNA synthetase-like core domain |
IPR009068 | S15/NS1, RNA-binding |
IPR027031 | Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 |
Mapman id | Description |
---|---|
17.2.9 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.glycine-tRNA ligase |