Gene: Sopen11g011720

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g011720
  • Transcript Identifier Sopen11g011720.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 15234340-15241242 : positive

Gene Family Information

  • ID HOM05D002810
  • #Genes/#Species 247/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g011720.1

Descriptions

  • Description glycyl-tRNA synthetase / glycine--tRNA ligase | FUNCTIONS IN: glycine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding | INVOLVED IN: response to cadmium ion, glycyl-tRNA aminoacylation | LOCATED IN: mitochondrion | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain , Glycyl-tRNA synthetase, alpha2 dimer , S15/NS1, RNA-binding , Glycyl-tRNA synthetase, alpha2 dimer, C-terminal , Anticodon-binding , WHEP-TRS , Aminoacyl-tRNA synthetase, class II, conserved domain | BEST Arabidopsis thaliana protein match is: tRNA synthetase class II (G, H, P and S) family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006426
IEA
InterProglycyl-tRNA aminoacylation
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G29880

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
InterPronucleotide binding
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0005524
IEA
InterProATP binding
GO:0004820
IEA
InterProglycine-tRNA ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT1G29880
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT1G29880
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G29880
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G29880
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT1G29880

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2
IPR009068 S15/NS1, RNA-binding
IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
IPR036621 Anticodon-binding domain superfamily
IPR000738 WHEP-TRS domain
IPR002315 Glycyl-tRNA synthetase
IPR033731 Glycyl-tRNA synthetase-like core domain
IPR004154 Anticodon-binding
Mapman id Description
17.2.9 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glycine-tRNA ligase