Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p16570 Brassica napus
A07p16580 Brassica napus
A09p09440 Brassica napus
Aa31LG1G15870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1119 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1430 Anthoceros agrestis
Actinidia03813 Actinidia chinensis
Actinidia03814 Actinidia chinensis
Actinidia08243 Actinidia chinensis
Actinidia21248 Actinidia chinensis
Actinidia21249 Actinidia chinensis
Actinidia21250 Actinidia chinensis
Actinidia21590 Actinidia chinensis
Actinidia22667 Actinidia chinensis
AL8G44010 Arabidopsis lyrata
Aqoxy5G01132 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8C3BXP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H8DGBI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KSX8X1 Arachis hypogaea
AT5G67320 Arabidopsis thaliana
ATR0041G007 Amborella trichopoda
Atru.chr3.237 Acer truncatum
Atru.chr3.238 Acer truncatum
AUR62003945 Chenopodium quinoa
AUR62038259 Chenopodium quinoa
BcaB04g20066 Brassica carinata
BcaC04g23207 Brassica carinata
BcaC06g34819 Brassica carinata
BolC7t42955H Brassica oleracea
BolC9t54001H Brassica oleracea
BraA09t36593Z Brassica rapa
C07p24260 Brassica napus
C07p24280 Brassica napus
C07p24300 Brassica napus
C07p24330 Brassica napus
C09p11120 Brassica napus
CAN.G1054.5 Capsicum annuum
CAN.G107.42 Capsicum annuum
CAN.G107.47 Capsicum annuum
CAN.G1449.20 Capsicum annuum
CAN.G1449.21 Capsicum annuum
CAN.G1910.3 Capsicum annuum
CAN.G3396.1 Capsicum annuum
CAN.G767.52 Capsicum annuum
CAN.G767.56 Capsicum annuum
CAN.G767.57 Capsicum annuum
CANSAT25G0169 Cannabis sativa
CANSAT25G1395 Cannabis sativa
CARHR280290 Cardamine hirsuta
Carub.0008s2717 Capsella rubella
Ca_13940_v3 Cicer arietinum L.
Ca_24733_v3 Cicer arietinum L.
CBR_g32362 Chara braunii
Cc07_g06500 Coffea canephora
Cc10_g05270 Coffea canephora
CDE02G1419 Ceratophyllum demersum
Cfa004076 Carpinus fangiana
Cfa018035 Carpinus fangiana
Ciclev10025285m.g Citrus clementina
CiPaw.01G009600 Carya illinoinensis
CiPaw.16G035100 Carya illinoinensis
ClCG01G017150 Citrullus lanatus
COL.COLO4_11505 Corchorus olitorius
Cpa.g.sc6.77 Carica papaya
Cpa.g.sc6.78 Carica papaya
Cre07.g347950 Chlamydomonas reinhardtii
Cre12.g527500 Chlamydomonas reinhardtii
CsaV3_6G043670 Cucumis sativus L.
CSS0010477 Camellia sinensis var. sinensis
CSS0014373 Camellia sinensis var. sinensis
CSS0024793 Camellia sinensis var. sinensis
CSS0037065 Camellia sinensis var. sinensis
CSS0042779 Camellia sinensis var. sinensis
CSS0045917 Camellia sinensis var. sinensis
DCAR_010847 Daucus carota
DCAR_010848 Daucus carota
DCAR_012802 Daucus carota
DCAR_025494 Daucus carota
Dinv26877 Davidia involucrata
Dinv26878 Davidia involucrata
Dinv30049 Davidia involucrata
Dinv35913 Davidia involucrata
Dinv39256 Davidia involucrata
Duzib147G0499 Durio zibethinus
Duzib264G1043 Durio zibethinus
ECA247G2795 Erigeron canadensis
EL10Ac6g15682 Beta vulgaris
EL10As7g23823 Beta vulgaris
Eucgr.I00742 Eucalyptus grandis
FAN15G0283 Fragaria x ananassa
FAN15G1883 Fragaria x ananassa
FAN19G3064 Fragaria x ananassa
FAN20G1488 Fragaria x ananassa
FAN23G0361 Fragaria x ananassa
FAN24G2212 Fragaria x ananassa
FAN26G0639 Fragaria x ananassa
FAN27G3042 Fragaria x ananassa
FAN28G0371 Fragaria x ananassa
FvH4_1g16940 Fragaria vesca
FvH4_2g33540 Fragaria vesca
Glyma.04G043300 Glycine max
Glyma.05G100500 Glycine max
Glyma.06G043800 Glycine max
Glyma.11G051700 Glycine max
Glyma.17G165702 Glycine max
Glyma.17G165900 Glycine max
Gohir.A02G154600 Gossypium hirsutum
Gohir.A11G047800 Gossypium hirsutum
Gohir.A11G219200 Gossypium hirsutum
Gohir.D03G025900 Gossypium hirsutum
Gohir.D11G051400 Gossypium hirsutum
Gohir.D11G204300 Gossypium hirsutum
Gorai.003G027600 Gossypium raimondii
Gorai.007G055800 Gossypium raimondii
Gorai.007G219300 Gossypium raimondii
GSVIVG01000179001 Vitis vinifera
GSVIVG01009402001 Vitis vinifera
GSVIVG01009403001 Vitis vinifera
HanXRQChr04g0103361 Helianthus annuus
HanXRQChr05g0133391 Helianthus annuus
HanXRQChr14g0428981 Helianthus annuus
HanXRQChr14g0449681 Helianthus annuus
HanXRQChr14g0449691 Helianthus annuus
Haze_15337 Corylus avellana
Haze_18089 Corylus avellana
Haze_26121 Corylus avellana
Hma1.2p1_0240F.1_g100120 Hydrangea macrophylla
HPP92_020480 Vanilla planifolia
Hund05323 Selenicereus undatus
Hund16370 Selenicereus undatus
Lalb_Chr05g0226131 Lupinus albus
Lalb_Chr08g0245421 Lupinus albus
Lalb_Chr09g0334001 Lupinus albus
Lalb_Chr16g0378751 Lupinus albus
Lalb_Chr16g0388841 Lupinus albus
Lj2g0012944 Lotus japonicus
Lj4A762T8 Lonicera japonica
Lsat_1_v5_gn_1_24041 Lactuca sativa
Lsat_1_v5_gn_2_85441 Lactuca sativa
Lsat_1_v5_gn_7_18100 Lactuca sativa
Manes.12G109000 Manihot esculenta
Manes.13G116500 Manihot esculenta
Mapoly0104s0042 Marchantia polymorpha
MCO02G223 Micromonas commoda
MD02G1179800 Malus domestica
MD15G1075300 Malus domestica
MD15G1290400 Malus domestica
Medtr4g095058 Medicago truncatula
Medtr5g016350 Medicago truncatula
Medtr5g016370 Medicago truncatula
MELO3C007593.2 Cucumis melo
Migut.C00519 Erythranthe guttata
Migut.H00383 Erythranthe guttata
Migut.N02755 Erythranthe guttata
Migut.O00600 Erythranthe guttata
MSTRG.23707 Avicennia marina
MSTRG.25062 Avicennia marina
Nitab4.5_0000569g0150 Nicotiana tabacum
Nitab4.5_0000838g0220 Nicotiana tabacum
Nitab4.5_0000934g0230 Nicotiana tabacum
Nitab4.5_0003633g0010 Nicotiana tabacum
Nn5g30448 Nelumbo nucifera
Oeu003573.1 Olea europaea
Oeu011602.1 Olea europaea
Os03g0607800 Oryza sativa ssp. japonica
Os07g0405100 Oryza sativa ssp. japonica
Peaxi162Scf00160g00029 Petunia axillaris
Peaxi162Scf00848g00317 Petunia axillaris
PGR004G2669 Punica granatum
PGSC0003DMG400015429 Solanum tuberosum
PGSC0003DMG400024170 Solanum tuberosum
PGSC0003DMG400038331 Solanum tuberosum
PGSC0003DMG400039505 Solanum tuberosum
PGSC0003DMG400042597 Solanum tuberosum
PGSC0003DMG400043199 Solanum tuberosum
PGSC0003DMG400046191 Solanum tuberosum
Phvul.002G014600 Phaseolus vulgaris
Phvul.003G239000 Phaseolus vulgaris
Phvul.009G068800 Phaseolus vulgaris
Potri.005G144400 Populus trichocarpa
Potri.007G050100 Populus trichocarpa
Pp3c13_5760 Physcomitrium patens
PRCOL_00000660 Prasinoderma coloniale
Prupe.1G428200 Prunus persica
Prupe.6G226500 Prunus persica
Psat2g169320 Pisum sativum
Psat4g083960 Pisum sativum
PSO170G2848 Papaver somniferum
PSO210G0654 Papaver somniferum
PSO541G4236 Papaver somniferum
PSO782G2206 Papaver somniferum
QL01p022252 Quercus lobata
QL02p003120 Quercus lobata
QL02p003212 Quercus lobata
QL03p022872 Quercus lobata
QL06p040017 Quercus lobata
RcHm_v2.0_Chr2g0107021 Rosa chinensis
RcHm_v2.0_Chr6g0308951 Rosa chinensis
Rhsim06G0058000 Rhododendron simsii
Rhsim08G0097400 Rhododendron simsii
Sabra07G0044500 Salix brachista
SalBow6G2177 Salvia bowleyana
SalBow7G2278 Salvia bowleyana
Sc02g0007620 Simmondsia chinensis
Sc16g0001440 Simmondsia chinensis
Sed0007301 Sechium edule
Sed0022856 Sechium edule
SEGI_04363 Sequoiadendron giganteum
SEGI_04881 Sequoiadendron giganteum
SGA_v2.0_scaffold102G29893 Striga asiatica
SGA_v2.0_scaffold15G07390 Striga asiatica
SGA_v2.0_scaffold214G42258 Striga asiatica
SHI23106 Sapria himalayana
SHI23109 Sapria himalayana
SMO118G0254 Selaginella moellendorffii
Solyc04g078320.4 Solanum lycopersicum
Solyc05g014420.3 Solanum lycopersicum
Solyc05g014460.3 Solanum lycopersicum
Solyc07g021350.1 Solanum lycopersicum
Solyc07g021360.1 Solanum lycopersicum
Solyc09g015500.1 Solanum lycopersicum
Solyc09g064770.1 Solanum lycopersicum
Solyc12g049100.3 Solanum lycopersicum
Solyc12g062700.1 Solanum lycopersicum
Solyc12g088540.3 Solanum lycopersicum
Solyc12g088570.3 Solanum lycopersicum
Solyc12g088620.2 Solanum lycopersicum
Solyc12g088630.2 Solanum lycopersicum
Sopen02g002170 Solanum pennellii
Sopen04g031910 Solanum pennellii
Sopen05g009550 Solanum pennellii
Sopen12g023530 Solanum pennellii
Sopen12g030510 Solanum pennellii
Sopen12g030520 Solanum pennellii
Sopen12g030530 Solanum pennellii
Sp2g29340 Schrenkiella parvula
TAR376G0230 Trochodendron aralioides
TAR381G1718 Trochodendron aralioides
TAR625G1461 Trochodendron aralioides
THA.LOC104819248 Tarenaya hassleriana
THA.LOC104821238 Tarenaya hassleriana
Thecc.01G065500 Theobroma cacao
Thecc.02G110500 Theobroma cacao
Thhalv10003834m.g Eutrema salsugineum
TPR.G23895 Trifolium pratense
TPR.G26905 Trifolium pratense
TWI09G1405 Tripterygium wilfordii
TWI73G0945 Tripterygium wilfordii
unitig_22.g6760 Utricularia gibba
unitig_8.g3367 Utricularia gibba
vmacro21472 Vaccinium macrocarpon
VMungo0251G1850 Vigna mungo
VMungo1215G1682 Vigna mungo
VMungo1309G3030 Vigna mungo
Zm00001eb051730 Zea mays
Zm00001eb051740 Zea mays
Zm00001eb088250 Zea mays
Zm00001eb199210 Zea mays
Zm00001eb199220 Zea mays
Zm00001eb419800 Zea mays

User provided reference genes

Program Settings