Gene: Solyc12g088570.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc12g088570.3
- Transcript Identifier Solyc12g088570.3.1
- Gene Type Coding gene
- Location SL4.0ch12 : 63440675-63442368 : negative
Gene Family Information
- ID HOM05D002634
- #Genes/#Species 260/98
- Phylogenetic origin
- ID ORTHO05D003100
- #Genes/#Species 244/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc12g088570.3.1
- gene_id Solyc12g088570
Descriptions
- Description WD40 repeat (AHRD V3.3 *-* A0A200QZN3_9MAGN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT5G67320 |
| GO:0016575 | ISO | PLAZA Integrative Orthology | histone deacetylation | AT5G67320 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003690 | ISO | PLAZA Integrative Orthology | double-stranded DNA binding | AT5G67320 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G67320 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.3.2.1.1.1.3 | Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.HDA9-PWR deacetylation complex.component HOS15 |