Gene: CsaV3_6G043670

General Information

Structural Information

  • Species Cucumis sativus L.
  • Gene Identifier CsaV3_6G043670
  • Transcript Identifier CsaV3_6G043670.1
  • Gene Type Coding gene
  • Location chr6 : 25746845-25758469 : positive

Gene Family Information

  • ID HOM05D002634
  • #Genes/#Species 260/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid CsaV3_6G043670.1

Descriptions

  • Description F-box-like/WD repeat-containing protein TBL1XR1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G67320
GO:0016575
ISO
PLAZA Integrative Orthologyhistone deacetylation AT5G67320

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003690
ISO
PLAZA Integrative Orthologydouble-stranded DNA binding AT5G67320

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G67320

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020472 G-protein beta WD-40 repeat
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR006594 LIS1 homology motif
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
12.3.2.1.1.1.3 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.HDA9-PWR deacetylation complex.component HOS15