Gene: AT5G67320

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G67320
  • Transcript Identifier AT5G67320.1
  • Gene Type Coding gene
  • Location Chr5 : 26857268-26860974 : positive

Gene Family Information

  • ID HOM05D002634
  • #Genes/#Species 260/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G67320.1
  • symbol HOS15
  • full_name high expression of osmotically responsive genes 15
  • uniprot Q9FN19

Descriptions

  • Description WD-40 repeat family protein
  • Computational description high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
IMP
Gene Ontologyresponse to cold1
GO:0016575
IMP
IBA
Gene Ontologyhistone deacetylation1 2
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II2
GO:0045892
IEA
GOA Databasenegative regulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003690
IDA
Gene Ontologydouble-stranded DNA binding3
GO:0003714
IBA
Gene Ontologytranscription corepressor activity2
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus1
GO:0080008
ISS
Gene OntologyCul4-RING E3 ubiquitin ligase complex4
GO:0000118
IBA
Gene Ontologyhistone deacetylase complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR001680 WD40 repeat
IPR006594 LIS1 homology motif
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
12.3.2.1.1.1.3 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.HDA9-PWR deacetylation complex.component HOS15