Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p20000 Brassica napus
A02p12210 Brassica napus
A09p23030 Brassica napus
Aa31LG6G140 Aethionema arabicum
Aa31sc151G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2981 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.299 Anthoceros agrestis
Actinidia02147 Actinidia chinensis
Actinidia14412 Actinidia chinensis
Ah.13g077420 Amaranthus hybridus
AL7G37310 Arabidopsis lyrata
AL8G10610 Arabidopsis lyrata
Aqoxy2G03401 Aquilegia oxysepala
Aqoxy4G00383 Aquilegia oxysepala
Aqoxy5G00460 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.18SBFH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2PBN0R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3AS7PC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.40EGC8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.81HEJY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.98R2QB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AB5AZK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F98T17 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H0C62V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PD7I3L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V507XA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VIP11X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y2TGKW Arachis hypogaea
AT4G17410 Arabidopsis thaliana
AT5G47430 Arabidopsis thaliana
ATR0665G118 Amborella trichopoda
ATR0665G179 Amborella trichopoda
ATR0691G046 Amborella trichopoda
ATR0697G259 Amborella trichopoda
Atru.chr1.2693 Acer truncatum
Atru.chr1.2694 Acer truncatum
Atru.chr7.809 Acer truncatum
Atru.chr7.815 Acer truncatum
Atru.chr9.1284 Acer truncatum
Atru.chr9.1285 Acer truncatum
AUR62007108 Chenopodium quinoa
AUR62018445 Chenopodium quinoa
AUR62019970 Chenopodium quinoa
AUR62020988 Chenopodium quinoa
BcaB04g18430 Brassica carinata
BcaB04g19161 Brassica carinata
BcaB05g22557 Brassica carinata
BcaB07g30777 Brassica carinata
BcaC01g01068 Brassica carinata
BcaC04g21626 Brassica carinata
BcaC09g50468 Brassica carinata
BcaNung00096 Brassica carinata
BolC1t02460H Brassica oleracea
BolC5t32094H Brassica oleracea
BolC9t55837H Brassica oleracea
BraA01t01923Z Brassica rapa
BraA05t19472Z Brassica rapa
BraA09t37907Z Brassica rapa
C01p25090 Brassica napus
C03p87620 Brassica napus
C05p33630 Brassica napus
C09p29740 Brassica napus
CAN.G1235.8 Capsicum annuum
CAN.G1329.25 Capsicum annuum
CAN.G236.11 Capsicum annuum
CAN.G841.7 Capsicum annuum
CANSAT21G1233 Cannabis sativa
CARHR173950 Cardamine hirsuta
CARHR224010 Cardamine hirsuta
Carub.0007s2401 Capsella rubella
Carub.0008s0036 Capsella rubella
Ca_03894_v3 Cicer arietinum L.
Ca_21976_v3 Cicer arietinum L.
CBR_g21758 Chara braunii
Cc08_g12210 Coffea canephora
CDE06G2836 Ceratophyllum demersum
CDE07G0056 Ceratophyllum demersum
CDE07G1967 Ceratophyllum demersum
Cfa017519 Carpinus fangiana
Cfa025439 Carpinus fangiana
Ciclev10018818m.g Citrus clementina
CiPaw.11G081500 Carya illinoinensis
ClCG10G002560 Citrullus lanatus
COL.COLO4_10827 Corchorus olitorius
COL.COLO4_15573 Corchorus olitorius
COL.COLO4_37135 Corchorus olitorius
Cpa.g.sc29.189 Carica papaya
Cpa.g.sc53.64 Carica papaya
Cre12.g543303 Chlamydomonas reinhardtii
CsaV3_3G002590 Cucumis sativus L.
CSS0000182 Camellia sinensis var. sinensis
CSS0008127 Camellia sinensis var. sinensis
DCAR_008503 Daucus carota
DCAR_027767 Daucus carota
Dinv01251 Davidia involucrata
Dinv04572 Davidia involucrata
Dinv21651 Davidia involucrata
Dinv25391 Davidia involucrata
Dinv39163 Davidia involucrata
Duzib041G0095 Durio zibethinus
Duzib068G0483 Durio zibethinus
Duzib205G1336 Durio zibethinus
Duzib213G0272 Durio zibethinus
ECA240G4211 Erigeron canadensis
EL10Ac3g07351 Beta vulgaris
EL10Ac5g12361 Beta vulgaris
Eucgr.E00408 Eucalyptus grandis
FAN04G1005 Fragaria x ananassa
FAN08G2557 Fragaria x ananassa
FAN13G1831 Fragaria x ananassa
FAN18G4043 Fragaria x ananassa
FvH4_5g19330 Fragaria vesca
Glyma.05G061500 Glycine max
Glyma.17G143300 Glycine max
Gohir.A04G046440 Gossypium hirsutum
Gohir.A04G046480 Gossypium hirsutum
Gohir.A07G155768 Gossypium hirsutum
Gohir.A08G168800 Gossypium hirsutum
Gohir.A12G215700 Gossypium hirsutum
Gohir.D08G187300 Gossypium hirsutum
Gohir.D12G218300 Gossypium hirsutum
Gorai.004G197000 Gossypium raimondii
Gorai.008G233900 Gossypium raimondii
Gorai.009G359800 Gossypium raimondii
GSVIVG01006271001 Vitis vinifera
HanXRQChr03g0088821 Helianthus annuus
HanXRQChr13g0417821 Helianthus annuus
Haze_07948 Corylus avellana
Haze_20631 Corylus avellana
Hma1.2p1_0316F.1_g122910 Hydrangea macrophylla
Hma1.2p1_0316F.1_g122915 Hydrangea macrophylla
HPP92_004365 Vanilla planifolia
HPP92_004367 Vanilla planifolia
Hund14574 Selenicereus undatus
Lalb_Chr05g0221181 Lupinus albus
Lalb_Chr05g0221191 Lupinus albus
Lalb_Chr09g0329991 Lupinus albus
Lalb_Chr16g0386791 Lupinus albus
Lj2A222G48 Lonicera japonica
Lj4g0017155 Lotus japonicus
Lj8A268G24 Lonicera japonica
Lsat_1_v5_gn_6_92441 Lactuca sativa
Manes.01G082800 Manihot esculenta
Manes.02G092000 Manihot esculenta
Manes.16G090700 Manihot esculenta
Manes.16G090800 Manihot esculenta
Mapoly0024s0115 Marchantia polymorpha
Mapoly0094s0033 Marchantia polymorpha
MBI05_g04442_MAGBIO Magnolia biondii
MBI05_g04451_MAGBIO Magnolia biondii
MBI05_g33896_MAGBIO Magnolia biondii
MBI05_g33897_MAGBIO Magnolia biondii
MBI05_g42865_MAGBIO Magnolia biondii
MBI11_g07615_MAGBIO Magnolia biondii
MBI11_g31274_MAGBIO Magnolia biondii
MBI13_g25213_MAGBIO Magnolia biondii
MCO16G016 Micromonas commoda
MD04G1061900 Malus domestica
MD06G1055600 Malus domestica
Medtr3g053090 Medicago truncatula
Medtr4g059300 Medicago truncatula
Medtr4g100750 Medicago truncatula
Medtr5g081800 Medicago truncatula
Medtr5g097760 Medicago truncatula
Medtr5g098230 Medicago truncatula
Medtr7g098820 Medicago truncatula
MELO3C013928.2 Cucumis melo
Migut.A01039 Erythranthe guttata
Migut.A01126 Erythranthe guttata
MSTRG.12118 Avicennia marina
Nitab4.5_0000348g0110 Nicotiana tabacum
Nitab4.5_0001070g0030 Nicotiana tabacum
Nitab4.5_0004277g0010 Nicotiana tabacum
Nitab4.5_0006555g0030 Nicotiana tabacum
Nn1g02339 Nelumbo nucifera
Nn4g26338 Nelumbo nucifera
Oeu000209.1 Olea europaea
Oeu000216.1 Olea europaea
Oeu000221.1 Olea europaea
Oeu002328.2 Olea europaea
Oeu004279.1 Olea europaea
Oeu022895.1 Olea europaea
Oeu040208.1 Olea europaea
Os03g0335100 Oryza sativa ssp. japonica
Os03g0659400 Oryza sativa ssp. japonica
Os10g0431000 Oryza sativa ssp. japonica
Peaxi162Scf00076g00063 Petunia axillaris
Peaxi162Scf00076g00915 Petunia axillaris
Peaxi162Scf01003g00012 Petunia axillaris
Peaxi162Scf01662g00119 Petunia axillaris
PGR042G3434 Punica granatum
PGSC0003DMG400001600 Solanum tuberosum
PGSC0003DMG400001652 Solanum tuberosum
PGSC0003DMG400010163 Solanum tuberosum
PGSC0003DMG402028242 Solanum tuberosum
Phvul.003G221275 Phaseolus vulgaris
Phvul.003G222100 Phaseolus vulgaris
Potri.001G156000 Populus trichocarpa
Potri.003G078800 Populus trichocarpa
Potri.013G112200 Populus trichocarpa
Pp3c1_38750 Physcomitrium patens
Pp3c2_9100 Physcomitrium patens
PRCOL_00006554 Prasinoderma coloniale
Prupe.5G066400 Prunus persica
Psat2g178240 Pisum sativum
Psat4g074080 Pisum sativum
Psat5g188640 Pisum sativum
Psat6g199520 Pisum sativum
PSO017G3097 Papaver somniferum
PSO017G7086 Papaver somniferum
PSO063G0292 Papaver somniferum
PSO210G4067 Papaver somniferum
PSO210G5624 Papaver somniferum
PSO210G7426 Papaver somniferum
PSO761G0324 Papaver somniferum
PSO761G0561 Papaver somniferum
PSO832G0398 Papaver somniferum
QL12p011564 Quercus lobata
RcHm_v2.0_Chr2g0120491 Rosa chinensis
RcHm_v2.0_Chr2g0120501 Rosa chinensis
RcHm_v2.0_Chr2g0120511 Rosa chinensis
RcHm_v2.0_Chr5g0053801 Rosa chinensis
RcHm_v2.0_Chr7g0203801 Rosa chinensis
Rhsim07G0110400 Rhododendron simsii
Rhsim11G0000900 Rhododendron simsii
Sabra01G0134900 Salix brachista
Sabra03G0048900 Salix brachista
Sabra13G0095300 Salix brachista
Sc01g0008310 Simmondsia chinensis
Sc22g0000970 Simmondsia chinensis
Sed0012573 Sechium edule
SEGI_13497 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30173 Striga asiatica
SGA_v2.0_scaffold199G41180 Striga asiatica
SHI07710 Sapria himalayana
SHI07795 Sapria himalayana
SHI07796 Sapria himalayana
SMO115G0156 Selaginella moellendorffii
SMO356G0348 Selaginella moellendorffii
SMO367G1268 Selaginella moellendorffii
Solyc01g110950.3 Solanum lycopersicum
Solyc03g025260.1 Solanum lycopersicum
Solyc10g083150.3 Solanum lycopersicum
Sopen01g052990 Solanum pennellii
Sopen03g004090 Solanum pennellii
Sopen10g032620 Solanum pennellii
Sp2g12130 Schrenkiella parvula
Sp7g16790 Schrenkiella parvula
TAR376G1023 Trochodendron aralioides
TAR629G3140 Trochodendron aralioides
TAR633G0646 Trochodendron aralioides
TAR636G2655 Trochodendron aralioides
TAR636G3267 Trochodendron aralioides
THA.LOC104798367 Tarenaya hassleriana
THA.LOC104814469 Tarenaya hassleriana
Thecc.03G248600 Theobroma cacao
Thecc.07G145300 Theobroma cacao
Thecc.10G082600 Theobroma cacao
Thhalv10000768m.g Eutrema salsugineum
Thhalv10024408m.g Eutrema salsugineum
TPR.G20363 Trifolium pratense
TPR.G24353 Trifolium pratense
TWI81G0262 Tripterygium wilfordii
unitig_8.g3015 Utricularia gibba
vmacro00186 Vaccinium macrocarpon
vmacro14069 Vaccinium macrocarpon
vmacro20086 Vaccinium macrocarpon
VMungo0251G3547 Vigna mungo
Zm00001eb047610 Zea mays
Zm00001eb052630 Zea mays
Zm00001eb218140 Zea mays

User provided reference genes

Program Settings