Gene: Sopen01g052990

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g052990
  • Transcript Identifier Sopen01g052990.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 108242526-108243653 : negative

Gene Family Information

  • ID HOM05D002513
  • #Genes/#Species 271/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g052990.1

Descriptions

  • Description DWNN domain, a CCHC-type zinc finger | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: nucleus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: DWNN domain | BEST Arabidopsis thaliana protein match is: DWNN domain, a CCHC-type zinc finger .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
InterPromRNA processing
GO:0016567
IEA
InterProprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
IEA
InterProubiquitin protein ligase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0008270
IEA
InterProzinc ion binding
GO:0003676
ISO
PLAZA Homology (enrichment)nucleic acid binding HOM05D002513

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025829 Zinc knuckle CX2CX3GHX4C
IPR033489 E3 ubiquitin-protein ligase RBBP6 family
IPR003613 U box domain
IPR014891 DWNN domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
16.3.1.2.8 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.ubiquitin ligase component PQT3/MPE1