Gene: CSS0008127

General Information

Structural Information

  • Species Camellia sinensis var. sinensis
  • Gene Identifier CSS0008127
  • Transcript Identifier CSS0008127.1
  • Gene Type Coding gene
  • Location Chr12 : 137684914-137692541 : positive

Gene Family Information

  • ID HOM05D002513
  • #Genes/#Species 271/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid CSS0008127.1

Descriptions

  • Description PREDICTED: uncharacterized protein LOC104596546 isoform X1 [Nelumbo nucifera]
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT4G17410
GO:0034971
ISO
PLAZA Integrative Orthologyhistone H3-R17 methylation AT4G17410
GO:0010555
ISO
PLAZA Integrative Orthologyresponse to mannitol AT4G17410
GO:0072756
ISO
PLAZA Integrative Orthologycellular response to paraquat AT4G17410
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT4G17410
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT4G17410
GO:0042542
ISO
PLAZA Integrative Orthologyresponse to hydrogen peroxide AT4G17410
GO:1902884
ISO
PLAZA Integrative Orthologypositive regulation of response to oxidative stress AT4G17410
GO:1901562
ISO
PLAZA Integrative Orthologyresponse to paraquat AT4G17410
GO:1902883
ISO
PLAZA Integrative Orthologynegative regulation of response to oxidative stress AT4G17410
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT4G17410
GO:0016567
IEA
InterProprotein ubiquitination
GO:0006397
IEA
InterPromRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G17410
GO:0008270
IEA
InterProzinc ion binding
GO:0061659
ISO
PLAZA Integrative Orthologyubiquitin-like protein ligase activity AT4G17410
GO:0003676
IEA
InterPronucleic acid binding
GO:0061630
IEA
InterProubiquitin protein ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G17410

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014891 DWNN domain
IPR033489 E3 ubiquitin-protein ligase RBBP6 family
IPR025829 Zinc knuckle CX2CX3GHX4C
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR036875 Zinc finger, CCHC-type superfamily
Mapman id Description
16.3.1.2.8 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.ubiquitin ligase component PQT3/MPE1