Gene: Carub.0008s0036

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s0036
  • Transcript Identifier Carub.0008s0036.1
  • Gene Type Coding gene
  • Location scaffold_8 : 110842-115779 : positive

Gene Family Information

  • ID HOM05D002513
  • #Genes/#Species 271/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s0036.v1.1
  • pacid 39251219
  • synonym Carubv10025857m.g

Descriptions

  • Description K10624 - E3 ubiquitin-protein ligase RBBP6 [EC:6.3.2.19] (RBBP6)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
InterPromRNA processing
GO:0016567
IEA
InterProprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0061630
IEA
InterProubiquitin protein ligase activity
GO:0003676
IEA
InterPronucleic acid binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014891 DWNN domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR033489 E3 ubiquitin-protein ligase RBBP6 family
IPR036875 Zinc finger, CCHC-type superfamily
IPR025829 Zinc knuckle CX2CX3GHX4C
Mapman id Description
16.3.1.2.8 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.ubiquitin ligase component PQT3/MPE1