Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p21380 Brassica napus
A05p07490 Brassica napus
A07p33790 Brassica napus
A07p34020 Brassica napus
A07p34040 Brassica napus
Aa31LG5G23370 Aethionema arabicum
Actinidia13640 Actinidia chinensis
Actinidia20794 Actinidia chinensis
Actinidia29027 Actinidia chinensis
Actinidia31634 Actinidia chinensis
Ah.05g171950 Amaranthus hybridus
Ah.13g073320 Amaranthus hybridus
AL4G35420 Arabidopsis lyrata
AL4G35490 Arabidopsis lyrata
AL4G35840 Arabidopsis lyrata
AL4G41290 Arabidopsis lyrata
AL4G41300 Arabidopsis lyrata
Aqoxy4G03275 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AB1T8P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XP7Q91 Arachis hypogaea
AT2G38560 Arabidopsis thaliana
AT2G42725 Arabidopsis thaliana
AT4G18720 Arabidopsis thaliana
AT5G42325 Arabidopsis thaliana
ATR1127G212 Amborella trichopoda
Atru.chr12.197 Acer truncatum
Atru.chr12.198 Acer truncatum
Atru.chr6.2101 Acer truncatum
Atru.chr6.2102 Acer truncatum
Atru.chr8.93 Acer truncatum
Atru.chr8.94 Acer truncatum
Atru.chr8.942 Acer truncatum
AUR62002430 Chenopodium quinoa
AUR62023758 Chenopodium quinoa
BcaB01g03676 Brassica carinata
BcaB02g09184 Brassica carinata
BcaB03g15191 Brassica carinata
BcaB03g15193 Brassica carinata
BcaB03g15907 Brassica carinata
BcaC01g05530 Brassica carinata
BcaC01g05531 Brassica carinata
BcaC02g12009 Brassica carinata
BcaC08g46157 Brassica carinata
BcaC08g46244 Brassica carinata
BcaNung05076 Brassica carinata
BcaNung05582 Brassica carinata
BolC3t14919H Brassica oleracea
BolC4t22486H Brassica oleracea
BolC6t39125H Brassica oleracea
BolC6t39159H Brassica oleracea
BolC6t39161H Brassica oleracea
BolC6t39164H Brassica oleracea
BraA03t11373Z Brassica rapa
BraA05t19714Z Brassica rapa
BraA07t31005Z Brassica rapa
BraA07t31029Z Brassica rapa
C03p25250 Brassica napus
C04p08970 Brassica napus
C06p41840 Brassica napus
C06p42750 Brassica napus
C06p42800 Brassica napus
C06p42820 Brassica napus
C06p43140 Brassica napus
CAN.G1229.11 Capsicum annuum
CAN.G598.16 Capsicum annuum
CANSAT56G0568 Cannabis sativa
CARHR133240 Cardamine hirsuta
Carub.0004s2055 Capsella rubella
Carub.0004s2517 Capsella rubella
Ca_16859_v3 Cicer arietinum L.
Ca_29507_v3 Cicer arietinum L.
CBR_g48579 Chara braunii
Cc02_g05240 Coffea canephora
CDE04G0622 Ceratophyllum demersum
CDE04G3210 Ceratophyllum demersum
CDE04G3441 Ceratophyllum demersum
CDE12G0219 Ceratophyllum demersum
Cfa001198 Carpinus fangiana
Cfa019576 Carpinus fangiana
Cfa020347 Carpinus fangiana
Cfa020348 Carpinus fangiana
Cfa020614 Carpinus fangiana
Cfa021026 Carpinus fangiana
Ciclev10003866m.g Citrus clementina
Ciclev10004043m.g Citrus clementina
Ciclev10004051m.g Citrus clementina
Ciclev10011982m.g Citrus clementina
Ciclev10011998m.g Citrus clementina
Ciclev10013356m.g Citrus clementina
Ciclev10013487m.g Citrus clementina
Ciclev10013550m.g Citrus clementina
Ciclev10013562m.g Citrus clementina
Ciclev10013633m.g Citrus clementina
Ciclev10013672m.g Citrus clementina
Ciclev10013790m.g Citrus clementina
Ciclev10013883m.g Citrus clementina
Ciclev10013888m.g Citrus clementina
Ciclev10013972m.g Citrus clementina
Ciclev10021335m.g Citrus clementina
Ciclev10023273m.g Citrus clementina
Ciclev10023605m.g Citrus clementina
Ciclev10024181m.g Citrus clementina
Ciclev10024245m.g Citrus clementina
Ciclev10024570m.g Citrus clementina
CiPaw.01G307200 Carya illinoinensis
CiPaw.02G199100 Carya illinoinensis
ClCG11G005630 Citrullus lanatus
COL.COLO4_03929 Corchorus olitorius
COL.COLO4_19469 Corchorus olitorius
Cpa.g.c27218.2 Carica papaya
Cpa.g.c30173.2 Carica papaya
Cpa.g.c31254 Carica papaya
Cpa.g.c34878 Carica papaya
Cpa.g.c40325 Carica papaya
Cpa.g.c41267 Carica papaya
Cpa.g.sc17.122 Carica papaya
Cpa.g.sc17.131 Carica papaya
Cpa.g.sc17.133 Carica papaya
Cpa.g.sc17.136 Carica papaya
Cpa.g.sc17.140 Carica papaya
Cpa.g.sc17.142 Carica papaya
Cpa.g.sc17.144 Carica papaya
Cpa.g.sc17.145 Carica papaya
Cpa.g.sc6.370 Carica papaya
Cpa.g.sc736.1 Carica papaya
Cpa.g.sc736.3 Carica papaya
Cpa.g.sc86.75 Carica papaya
Cpa.g.sc956.1 Carica papaya
Cre09.g386350 Chlamydomonas reinhardtii
Cre16.g691776 Chlamydomonas reinhardtii
CsaV3_6G002370 Cucumis sativus L.
CSS0013434 Camellia sinensis var. sinensis
CSS0028562 Camellia sinensis var. sinensis
DCAR_018043 Daucus carota
DCAR_020154 Daucus carota
DCAR_025300 Daucus carota
Dinv16968 Davidia involucrata
Duzib151G1136 Durio zibethinus
ECA232G0035 Erigeron canadensis
ECA238G3222 Erigeron canadensis
EL10Ac3g06123 Beta vulgaris
Eucgr.A00774 Eucalyptus grandis
Eucgr.J00105 Eucalyptus grandis
FAN01G0935 Fragaria x ananassa
FAN03G1243 Fragaria x ananassa
FAN06G2672 Fragaria x ananassa
FAN10G0959 Fragaria x ananassa
FAN10G4373 Fragaria x ananassa
FAN20G1386 Fragaria x ananassa
FvH4_2g39201 Fragaria vesca
FvH4_7g26060 Fragaria vesca
Glyma.04G223500 Glycine max
Glyma.06G141700 Glycine max
Gohir.A02G002850 Gossypium hirsutum
Gohir.A09G213664 Gossypium hirsutum
Gohir.A10G153500 Gossypium hirsutum
Gohir.D02G003200 Gossypium hirsutum
Gohir.D09G215100 Gossypium hirsutum
Gohir.D10G112700 Gossypium hirsutum
Gorai.005G003700 Gossypium raimondii
Gorai.006G235600 Gossypium raimondii
Gorai.011G124500 Gossypium raimondii
GSVIVG01030171001 Vitis vinifera
GSVIVG01032658001 Vitis vinifera
HanXRQChr07g0205051 Helianthus annuus
HanXRQChr08g0216851 Helianthus annuus
HanXRQChr09g0252621 Helianthus annuus
HanXRQChr14g0460591 Helianthus annuus
Haze_09331 Corylus avellana
Haze_09396 Corylus avellana
Haze_09690 Corylus avellana
Haze_13096 Corylus avellana
Haze_17367 Corylus avellana
Hma1.2p1_0174F.1_g076750 Hydrangea macrophylla
HPP92_007540 Vanilla planifolia
HPP92_022864 Vanilla planifolia
Hund22971 Selenicereus undatus
Hund27145 Selenicereus undatus
Hund27194 Selenicereus undatus
Lalb_Chr08g0239251 Lupinus albus
Lalb_Chr11g0067721 Lupinus albus
Lalb_Chr23g0272141 Lupinus albus
Lj1C968T6 Lonicera japonica
Lj1g0009031 Lotus japonicus
Lj8C53T13 Lonicera japonica
Lsat_1_v5_gn_2_126800 Lactuca sativa
Lsat_1_v5_gn_9_60240 Lactuca sativa
Manes.07G142301 Manihot esculenta
Manes.08G170400 Manihot esculenta
Manes.09G123400 Manihot esculenta
Manes.10G002900 Manihot esculenta
Mapoly0003s0175 Marchantia polymorpha
MBI03_g05806_MAGBIO Magnolia biondii
MBI15_g36065_MAGBIO Magnolia biondii
MBI15_g39393_MAGBIO Magnolia biondii
MCO13G374 Micromonas commoda
MD01G1169100 Malus domestica
MD03G1264500 Malus domestica
MD03G1264600 Malus domestica
MD04G1039000 Malus domestica
MD07G1235000 Malus domestica
MD11G1243600 Malus domestica
MD11G1250500 Malus domestica
MD11G1285500 Malus domestica
Medtr3g093800 Medicago truncatula
MELO3C020014.2 Cucumis melo
Migut.F00569 Erythranthe guttata
MSTRG.27253 Avicennia marina
MSTRG.8876 Avicennia marina
Nitab4.5_0000171g0260 Nicotiana tabacum
Nitab4.5_0000375g0290 Nicotiana tabacum
Nitab4.5_0006356g0040 Nicotiana tabacum
Nitab4.5_0011372g0010 Nicotiana tabacum
Nn2g10273 Nelumbo nucifera
Nn4g24260 Nelumbo nucifera
Nn5g26830 Nelumbo nucifera
Oeu008104.2 Olea europaea
Oeu039385.1 Olea europaea
Oeu044181.1 Olea europaea
Os03g0815900 Oryza sativa ssp. japonica
Os07g0229700 Oryza sativa ssp. japonica
Peaxi162Scf00073g02341 Petunia axillaris
Peaxi162Scf00167g01124 Petunia axillaris
PGR031G2695 Punica granatum
PGR044G1486 Punica granatum
PGSC0003DMG400011644 Solanum tuberosum
PGSC0003DMG400020602 Solanum tuberosum
Phvul.009G042900 Phaseolus vulgaris
Potri.006G109300 Populus trichocarpa
Potri.016G138100 Populus trichocarpa
Pp3c26_5120 Physcomitrium patens
Pp3c4_25990 Physcomitrium patens
Pp3c8_2490 Physcomitrium patens
PRCOL_00006027 Prasinoderma coloniale
Prupe.2G265300 Prunus persica
Psat5g069320 Pisum sativum
PSO339G3554 Papaver somniferum
PSO384G2188 Papaver somniferum
QL02p018496 Quercus lobata
QL05p062213 Quercus lobata
QL08p065059 Quercus lobata
QL10p000746 Quercus lobata
QL10p004232 Quercus lobata
QL10p022116 Quercus lobata
QL10p023509 Quercus lobata
QL10p023517 Quercus lobata
QL10p023527 Quercus lobata
QL10p023539 Quercus lobata
QL10p023546 Quercus lobata
QL10p023558 Quercus lobata
QL10p023688 Quercus lobata
QL10p023700 Quercus lobata
QL10p023709 Quercus lobata
RcHm_v2.0_Chr1g0372471 Rosa chinensis
Rhsim04G0121300 Rhododendron simsii
Rhsim05G0231600 Rhododendron simsii
Sabra04G0154300 Salix brachista
Sabra06G0022900 Salix brachista
Sabra06G0085000 Salix brachista
Sabra16G0036000 Salix brachista
Sc14g0005650 Simmondsia chinensis
Sed0009415 Sechium edule
SMO364G0116 Selaginella moellendorffii
Solyc03g095720.3 Solanum lycopersicum
Solyc05g052190.4 Solanum lycopersicum
Sopen03g025650 Solanum pennellii
Sopen05g030730 Solanum pennellii
Sp1g37900 Schrenkiella parvula
Sp4g20900 Schrenkiella parvula
Sp5g22480 Schrenkiella parvula
TAR369G0520 Trochodendron aralioides
TAR381G0853 Trochodendron aralioides
TAR623G1532 Trochodendron aralioides
THA.LOC104806195 Tarenaya hassleriana
THA.LOC104813273 Tarenaya hassleriana
THA.LOC104823349 Tarenaya hassleriana
Thecc.04G150200 Theobroma cacao
Thecc.10G184700 Theobroma cacao
Thhalv10016682m.g Eutrema salsugineum
Thhalv10019665m.g Eutrema salsugineum
Thhalv10019757m.g Eutrema salsugineum
Thhalv10019809m.g Eutrema salsugineum
TPR.G13982 Trifolium pratense
TWI53G2065 Tripterygium wilfordii
TWI75G1199 Tripterygium wilfordii
TWI75G1318 Tripterygium wilfordii
TWI75G1748 Tripterygium wilfordii
TWI77G0614 Tripterygium wilfordii
unitig_37.g12475 Utricularia gibba
unitig_46.g18751 Utricularia gibba
vmacro08945 Vaccinium macrocarpon
vmacro20377 Vaccinium macrocarpon
VMungo1309G1834 Vigna mungo
Zm00001eb062210 Zea mays
Zm00001eb212040 Zea mays
Zm00001eb440670 Zea mays

User provided reference genes

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