Gene: Cpa.g.c30173.2
General Information
Structural Information
- Species Carica papaya
- Gene Identifier Cpa.g.c30173.2
- Transcript Identifier Cpa.t.c30173.2
- Gene Type Coding gene
- Location contig_30173 : 2635-3510 : positive
Gene Family Information
- ID HOM05D002276
- #Genes/#Species 296/95
- Phylogenetic origin
- ID ORTHO05D002381
- #Genes/#Species 293/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 16429796
- tid PAC:16429796
- id gevm.TU.contig_30173.2
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006351 | IEA | InterPro | transcription, DNA-templated | |
| GO:0006355 | ISO | PLAZA Homology (enrichment) | regulation of transcription, DNA-templated | HOM05D002276 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D002276 |
| GO:0008270 | ISO | PLAZA Homology (enrichment) | zinc ion binding | HOM05D002276 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR017923 | Transcription factor IIS, N-terminal |
| IPR035441 | TFIIS/LEDGF domain superfamily |
| IPR036575 | Transcription elongation factor S-II, central domain superfamily |
| IPR035100 | Transcription elongation factor, IIS-type |
| IPR003618 | Transcription elongation factor S-II, central domain |
| IPR003617 | Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |