Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p02790 Brassica napus
A03p02810 Brassica napus
A05p17440 Brassica napus
A05p36090 Brassica napus
A08p00600 Brassica napus
A09p66520 Brassica napus
Aa31LG10G730 Aethionema arabicum
Aa31LG8G660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2864 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4395 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3164 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3347 Anthoceros agrestis
Actinidia00913 Actinidia chinensis
Actinidia16231 Actinidia chinensis
Actinidia22092 Actinidia chinensis
Actinidia37353 Actinidia chinensis
Actinidia38617 Actinidia chinensis
Ah.01g006490 Amaranthus hybridus
Ah.08g222790 Amaranthus hybridus
AL1G63540 Arabidopsis lyrata
Aqoxy5G04361 Aquilegia oxysepala
Aqoxy7G00924 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.286I7U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B5NK5S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P1DIDD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SM1QYT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SQ84UD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T5KUV8 Arachis hypogaea
AT1G55520 Arabidopsis thaliana
AT3G13445 Arabidopsis thaliana
ATR0580G369 Amborella trichopoda
ATR0749G036 Amborella trichopoda
ATR0752G012 Amborella trichopoda
ATR0827G027 Amborella trichopoda
ATR0827G165 Amborella trichopoda
Atru.chr11.919 Acer truncatum
Atru.chr2.1343 Acer truncatum
AUR62001610 Chenopodium quinoa
AUR62011411 Chenopodium quinoa
AUR62016648 Chenopodium quinoa
AUR62020170 Chenopodium quinoa
AUR62027761 Chenopodium quinoa
BcaB01g05997 Brassica carinata
BcaB02g10818 Brassica carinata
BcaB04g16953 Brassica carinata
BcaB05g21658 Brassica carinata
BcaB05g21659 Brassica carinata
BcaB07g33210 Brassica carinata
BcaC01g01531 Brassica carinata
BcaC05g28734 Brassica carinata
BcaC05g29179 Brassica carinata
BcaC07g42013 Brassica carinata
BcaC08g43629 Brassica carinata
BcaC08g44201 Brassica carinata
BcaNung06580 Brassica carinata
BolC2t06243H Brassica oleracea
BolC3t12866H Brassica oleracea
BolC3t21589H Brassica oleracea
BolC5t33572H Brassica oleracea
BolC5t34114H Brassica oleracea
BolC6t36124H Brassica oleracea
BolC6t36808H Brassica oleracea
BolC8t52597H Brassica oleracea
BraA02t04886Z Brassica rapa
BraA03t09642Z Brassica rapa
BraA03t09644Z Brassica rapa
BraA05t20639Z Brassica rapa
BraA05t22416Z Brassica rapa
BraA08t32117Z Brassica rapa
C02p02780 Brassica napus
C03p03210 Brassica napus
C03p92830 Brassica napus
C05p54470 Brassica napus
C06p10460 Brassica napus
C06p16090 Brassica napus
C08p50690 Brassica napus
CAN.G245.1 Capsicum annuum
CAN.G282.67 Capsicum annuum
CANSAT21G0818 Cannabis sativa
CANSAT25G2162 Cannabis sativa
CARHR045200 Cardamine hirsuta
CARHR088100 Cardamine hirsuta
Carub.0001s4401 Capsella rubella
Carub.0003s1289 Capsella rubella
Ca_19770_v3 Cicer arietinum L.
Cc00_g08900 Coffea canephora
Cc01_g00250 Coffea canephora
Cc02_g02090 Coffea canephora
CDE02G2982 Ceratophyllum demersum
CDE04G0346 Ceratophyllum demersum
CDE05G0267 Ceratophyllum demersum
CDE05G3016 Ceratophyllum demersum
CDE07G0215 Ceratophyllum demersum
CDE10G0940 Ceratophyllum demersum
Cfa009536 Carpinus fangiana
Cfa009539 Carpinus fangiana
Cfa009542 Carpinus fangiana
Ciclev10033950m.g Citrus clementina
CiPaw.02G041800 Carya illinoinensis
CiPaw.05G071700 Carya illinoinensis
CiPaw.13G178600 Carya illinoinensis
ClCG03G012090 Citrullus lanatus
ClCG03G012100 Citrullus lanatus
ClCG03G014640 Citrullus lanatus
ClCG03G014650 Citrullus lanatus
COL.COLO4_00049 Corchorus olitorius
COL.COLO4_13616 Corchorus olitorius
COL.COLO4_14003 Corchorus olitorius
COL.COLO4_33701 Corchorus olitorius
COL.COLO4_34140 Corchorus olitorius
COL.COLO4_35337 Corchorus olitorius
Cpa.g.sc51.95 Carica papaya
Cre12.g505700 Chlamydomonas reinhardtii
CsaV3_1G041520 Cucumis sativus L.
CSS0013302 Camellia sinensis var. sinensis
DCAR_009248 Daucus carota
DCAR_016867 Daucus carota
Dinv13486 Davidia involucrata
Dinv37008 Davidia involucrata
Duzib106G0023 Durio zibethinus
Duzib106G0138 Durio zibethinus
Duzib106G0576 Durio zibethinus
Duzib106G1867 Durio zibethinus
Duzib128G0762 Durio zibethinus
Duzib160G0419 Durio zibethinus
Duzib177G0320 Durio zibethinus
Duzib177G0568 Durio zibethinus
ECA233G0802 Erigeron canadensis
ECA233G1438 Erigeron canadensis
ECA236G4430 Erigeron canadensis
ECA240G1881 Erigeron canadensis
EL10Ac7g16222 Beta vulgaris
EL10Ac9g21802 Beta vulgaris
Eucgr.K01483 Eucalyptus grandis
FAN02G2560 Fragaria x ananassa
FAN05G1025 Fragaria x ananassa
FAN07G1359 Fragaria x ananassa
FAN09G1843 Fragaria x ananassa
FAN11G0913 Fragaria x ananassa
FAN11G2433 Fragaria x ananassa
FAN11G3828 Fragaria x ananassa
FAN14G2253 Fragaria x ananassa
FAN14G2542 Fragaria x ananassa
FAN16G1873 Fragaria x ananassa
FAN19G0703 Fragaria x ananassa
FAN21G1264 Fragaria x ananassa
FAN21G1962 Fragaria x ananassa
FAN23G1243 Fragaria x ananassa
FAN25G0154 Fragaria x ananassa
FAN25G3655 Fragaria x ananassa
FAN26G1633 Fragaria x ananassa
FAN28G1683 Fragaria x ananassa
FAN28G2179 Fragaria x ananassa
FvH4_1g28010 Fragaria vesca
FvH4_3g32401 Fragaria vesca
FvH4_3g32403 Fragaria vesca
FvH4_3g32450 Fragaria vesca
FvH4_3g45850 Fragaria vesca
FvH4_4g21060 Fragaria vesca
FvH4_6g12030 Fragaria vesca
Glyma.02G057100 Glycine max
Glyma.03G036800 Glycine max
Glyma.09G276900 Glycine max
Glyma.16G140200 Glycine max
Glyma.18G212300 Glycine max
Glyma.19G111200 Glycine max
Gohir.A08G213400 Gossypium hirsutum
Gohir.A11G258300 Gossypium hirsutum
Gohir.A13G171800 Gossypium hirsutum
Gohir.D08G230500 Gossypium hirsutum
Gohir.D11G268300 Gossypium hirsutum
Gohir.D13G177600 Gossypium hirsutum
Gorai.013G202900 Gossypium raimondii
GSVIVG01025497001 Vitis vinifera
HanXRQChr03g0069271 Helianthus annuus
HanXRQChr10g0304991 Helianthus annuus
HanXRQChr16g0505421 Helianthus annuus
Haze_22927 Corylus avellana
Haze_26172 Corylus avellana
Hma1.2p1_0386F.1_g141790 Hydrangea macrophylla
HPP92_007933 Vanilla planifolia
HPP92_007950 Vanilla planifolia
HPP92_007951 Vanilla planifolia
HPP92_019524 Vanilla planifolia
Hund02026 Selenicereus undatus
Hund02027 Selenicereus undatus
Hund05839 Selenicereus undatus
Hund06196 Selenicereus undatus
Lalb_Chr07g0190661 Lupinus albus
Lalb_Chr07g0190671 Lupinus albus
Lalb_Chr12g0207601 Lupinus albus
Lj1A1137T82 Lonicera japonica
Lj1g0012267 Lotus japonicus
Lj1g0021223 Lotus japonicus
Lj2A357G78 Lonicera japonica
Lj3g0010186 Lotus japonicus
Lsat_1_v5_gn_5_120581 Lactuca sativa
Lsat_1_v5_gn_6_55861 Lactuca sativa
Lsat_1_v5_gn_6_55920 Lactuca sativa
Lsat_1_v5_gn_7_91520 Lactuca sativa
Lsat_1_v5_gn_9_108101 Lactuca sativa
Manes.08G149100 Manihot esculenta
Manes.09G142800 Manihot esculenta
Mapoly0025s0099 Marchantia polymorpha
MBI11_g05457_MAGBIO Magnolia biondii
MBI11_g05458_MAGBIO Magnolia biondii
MCO16G423 Micromonas commoda
MD03G1002100 Malus domestica
MD11G1002100 Malus domestica
MD12G1002700 Malus domestica
MD12G1176800 Malus domestica
MD14G1002000 Malus domestica
Medtr3g065900 Medicago truncatula
Medtr3g066070 Medicago truncatula
Medtr4g029010 Medicago truncatula
Medtr4g122610 Medicago truncatula
Medtr4g122635 Medicago truncatula
Medtr7g072580 Medicago truncatula
MELO3C015563.2 Cucumis melo
MSTRG.18035 Avicennia marina
MSTRG.20933 Avicennia marina
Nitab4.5_0000001g0040 Nicotiana tabacum
Nitab4.5_0000911g0050 Nicotiana tabacum
Nitab4.5_0002068g0060 Nicotiana tabacum
Nn2g15884 Nelumbo nucifera
Nn7g35830 Nelumbo nucifera
Oeu022083.1 Olea europaea
Oeu023972.1 Olea europaea
Oeu060895.2 Olea europaea
Os03g0657000 Oryza sativa ssp. japonica
Os12g0580300 Oryza sativa ssp. japonica
Peaxi162Scf00076g01050 Petunia axillaris
PGR119G0518 Punica granatum
PGR142G4380 Punica granatum
Phvul.001G076800 Phaseolus vulgaris
Phvul.006G062900 Phaseolus vulgaris
Phvul.010G081500 Phaseolus vulgaris
Potri.013G059300 Populus trichocarpa
Potri.019G033300 Populus trichocarpa
Pp3c12_4720 Physcomitrium patens
Pp3c4_16100 Physcomitrium patens
PRCOL_00000348 Prasinoderma coloniale
Prupe.6G001900 Prunus persica
Prupe.7G002500 Prunus persica
Prupe.7G002800 Prunus persica
Psat0s1135g0040 Pisum sativum
Psat0s1135g0240 Pisum sativum
Psat2g055000 Pisum sativum
Psat3g121040 Pisum sativum
Psat5g121280 Pisum sativum
Psat7g230160 Pisum sativum
PSO170G4543 Papaver somniferum
PSO339G0900 Papaver somniferum
PSO339G4383 Papaver somniferum
PSO339G5032 Papaver somniferum
PSO384G4207 Papaver somniferum
PSO478G4144 Papaver somniferum
QL01p010469 Quercus lobata
QL01p010488 Quercus lobata
RcHm_v2.0_Chr3g0463861 Rosa chinensis
RcHm_v2.0_Chr3g0497421 Rosa chinensis
RcHm_v2.0_Chr5g0059361 Rosa chinensis
RcHm_v2.0_Chr5g0083961 Rosa chinensis
Rhsim04G0087100 Rhododendron simsii
Rhsim13G0234100 Rhododendron simsii
Sabra13G0052700 Salix brachista
SalBow2G3503 Salvia bowleyana
SalBow6G3197 Salvia bowleyana
SalBow6G5773 Salvia bowleyana
Sc14g0001670 Simmondsia chinensis
Sed0009576 Sechium edule
Sed0023057 Sechium edule
SEGI_36240 Sequoiadendron giganteum
SGA_v2.0_scaffold3G01690 Striga asiatica
SGA_v2.0_scaffold3G01709 Striga asiatica
SGA_v2.0_scaffold6G03327 Striga asiatica
SHI25601 Sapria himalayana
SMO116G0412 Selaginella moellendorffii
SMO361G0654 Selaginella moellendorffii
Solyc01g028930.4 Solanum lycopersicum
Solyc01g150102.1 Solanum lycopersicum
Sopen01g003560 Solanum pennellii
Sopen01g017150 Solanum pennellii
Sp1g41130 Schrenkiella parvula
Sp3g11650 Schrenkiella parvula
Sp6g36230 Schrenkiella parvula
TAR623G0107 Trochodendron aralioides
TAR633G2813 Trochodendron aralioides
THA.LOC104805745 Tarenaya hassleriana
THA.LOC104805757 Tarenaya hassleriana
THA.LOC104805761 Tarenaya hassleriana
THA.LOC104822696 Tarenaya hassleriana
Thecc.01G125100 Theobroma cacao
Thecc.01G125200 Theobroma cacao
Thecc.01G125400 Theobroma cacao
Thecc.05G236100 Theobroma cacao
Thecc.05G293200 Theobroma cacao
Thhalv10011790m.g Eutrema salsugineum
Thhalv10021552m.g Eutrema salsugineum
Thhalv10022351m.g Eutrema salsugineum
TPR.G19738 Trifolium pratense
TWI09G0349 Tripterygium wilfordii
TWI09G1209 Tripterygium wilfordii
TWI34G0344 Tripterygium wilfordii
TWI53G0967 Tripterygium wilfordii
unitig_37.g13064 Utricularia gibba
vmacro04260 Vaccinium macrocarpon
vmacro04269 Vaccinium macrocarpon
vmacro09145 Vaccinium macrocarpon
Zm00001eb002410 Zea mays
Zm00001eb052680 Zea mays
Zm00001eb218190 Zea mays
Zm00001eb220320 Zea mays

User provided reference genes

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