Gene: Pp3c4_16100

General Information

Structural Information

Species Physcomitrium patens
Gene Identifier Pp3c4_16100
Transcript Identifier Pp3c4_16100V3.1
Gene Type Coding gene
Location Chr04 : 11134794-11137501 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002140
#Genes/#Species 313/96
Phylogenetic origin

ID ORTHO05D002382
#Genes/#Species 293/96
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

name Pp3c4_16100V3.1
pacid 32918813
alias Phypa_115252
alias Phpat.004G059500
alias Pp1s13_321V6
uniprot A0A2K1KNN3

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006352	IBA IEA	GOA Database	DNA-templated transcription, initiation
GO:0006352	IEA	InterPro	DNA-templated transcription, initiation
GO:0006366	IEA	GOA Database	transcription by RNA polymerase II

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003677	IEA	GOA Database	DNA binding
GO:0003677	IEA	InterPro	DNA binding
GO:0140223	IBA	GOA Database	general transcription initiation factor activity
GO:0016251	IBA	GOA Database	RNA polymerase II general transcription initiation factor activity
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G55520

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IEA	GOA Database	nucleus

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR033710	TATA-box binding protein, eukaryotic
IPR012295	TBP domain superfamily
IPR000814	TATA-box binding protein

Mapman id	Description
15.3.4.2.1	RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TFIId complex.TATA-box-binding component
15.4.1	RNA biosynthesis.RNA polymerase III-dependent transcription.TATA-box-binding protein (TBP)