Gene: AT1G55520

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G55520
  • Transcript Identifier AT1G55520.1
  • Gene Type Coding gene
  • Location Chr1 : 20726150-20727483 : negative

Gene Family Information

  • ID HOM05D002140
  • #Genes/#Species 313/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G55520.1
  • symbol TBP2
  • Alias ATTBP2,A. THALIANA TATA BINDING PROTEIN 2
  • uniprot P28148

Descriptions

  • Description TATA binding protein 2
  • Computational description TATA binding protein 2 (TBP2); CONTAINS InterPro DOMAIN/s: TATA-box binding (InterPro:IPR000814), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal (InterPro:IPR012294); BEST Arabidopsis thaliana protein match is: TATA binding protein 1 (TAIR:AT3G13445.1); Has 2123 Blast hits to 1580 proteins in 405 species: Archae - 736; Bacteria - 0; Metazoa - 578; Fungi - 191; Plants - 155; Viruses - 0; Other Eukaryotes - 463 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006352
IDA
IBA
IEA
Gene OntologyDNA-templated transcription, initiation1 2
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0006366
IEA
GOA Databasetranscription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017025
ISS
Gene OntologyTBP-class protein binding1
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IDA
Gene OntologyDNA binding3
GO:0003677
IEA
InterProDNA binding
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0140223
IBA
Gene Ontologygeneral transcription initiation factor activity2
GO:0016251
IBA
Gene OntologyRNA polymerase II general transcription initiation factor activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
TAS
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033710 TATA-box binding protein, eukaryotic
IPR000814 TATA-box binding protein
IPR012295 TBP domain superfamily
Mapman id Description
15.3.4.2.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TFIId complex.TATA-box-binding component
15.4.1 RNA biosynthesis.RNA polymerase III-dependent transcription.TATA-box-binding protein (TBP)