Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p41510 Brassica napus
A03p36720 Brassica napus
A07p04150 Brassica napus
A09p15060 Brassica napus
A09p15070 Brassica napus
A10p31130 Brassica napus
A10p31340 Brassica napus
Aa31LG11G5660 Aethionema arabicum
Aa31LG3G3670 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1375 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3462 Anthoceros agrestis
Actinidia00887 Actinidia chinensis
Actinidia00888 Actinidia chinensis
Actinidia24545 Actinidia chinensis
Ah.04g150230 Amaranthus hybridus
Ah.13g077370 Amaranthus hybridus
AL3G22210 Arabidopsis lyrata
AL6G38110 Arabidopsis lyrata
Aqoxy1G00043 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.01HJNS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.04X54Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.27D22C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3F4XJH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5DSF6M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A55SH9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L61C1A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N6HXMD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P271UT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V7A3IG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W685UJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X27AUR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X3JX39 Arachis hypogaea
AT3G10740 Arabidopsis thaliana
AT5G26120 Arabidopsis thaliana
ATR1096G009 Amborella trichopoda
Atru.chr1.1533 Acer truncatum
Atru.chr1.1534 Acer truncatum
Atru.chr2.360 Acer truncatum
AUR62008290 Chenopodium quinoa
AUR62008291 Chenopodium quinoa
AUR62018438 Chenopodium quinoa
AUR62020995 Chenopodium quinoa
AUR62031052 Chenopodium quinoa
AUR62031053 Chenopodium quinoa
BcaB04g18606 Brassica carinata
BcaB04g21181 Brassica carinata
BcaC01g04161 Brassica carinata
BcaC01g04167 Brassica carinata
BcaC03g14226 Brassica carinata
BcaC03g16150 Brassica carinata
BcaC03g17439 Brassica carinata
BcaC06g32217 Brassica carinata
BcaC08g45810 Brassica carinata
BolC1t05360H Brassica oleracea
BolC3t16705H Brassica oleracea
BolC6t38724H Brassica oleracea
BolC9t59925H Brassica oleracea
BolC9t59945H Brassica oleracea
BraA01t04225Z Brassica rapa
BraA03t12835Z Brassica rapa
BraA07t28206Z Brassica rapa
BraA09t37150Z Brassica rapa
BraA10t45157Z Brassica rapa
BraA10t45177Z Brassica rapa
C03p44350 Brassica napus
C06p36030 Brassica napus
C09p44750 Brassica napus
C09p71730 Brassica napus
C09p71980 Brassica napus
CAN.G128.102 Capsicum annuum
CAN.G959.32 Capsicum annuum
CAN.G959.33 Capsicum annuum
CANSAT11G0096 Cannabis sativa
CARHR057350 Cardamine hirsuta
CARHR085320 Cardamine hirsuta
CARHR187400 Cardamine hirsuta
CARHR208230 Cardamine hirsuta
Carub.0003s0997 Capsella rubella
Carub.0006s2389 Capsella rubella
Carub.0006s2390 Capsella rubella
Ca_04447_v3 Cicer arietinum L.
Ca_08327_v3 Cicer arietinum L.
Ca_08328_v3 Cicer arietinum L.
Ca_08348_v3 Cicer arietinum L.
CBR_g39154 Chara braunii
CBR_g55039 Chara braunii
Cc06_g22790 Coffea canephora
CDE08G0962 Ceratophyllum demersum
Cfa019926 Carpinus fangiana
Ciclev10011228m.g Citrus clementina
CiPaw.09G163200 Carya illinoinensis
CiPaw.09G163300 Carya illinoinensis
CiPaw.09G163400 Carya illinoinensis
CiPaw.09G163500 Carya illinoinensis
CiPaw.09G163600 Carya illinoinensis
CiPaw.09G163700 Carya illinoinensis
CiPaw.10G123400 Carya illinoinensis
ClCG10G016530 Citrullus lanatus
COL.COLO4_02962 Corchorus olitorius
Cpa.g.sc33.202 Carica papaya
Cpa.g.sc34.171 Carica papaya
Cpa.g.sc34.172 Carica papaya
Cpa.g.sc34.175 Carica papaya
CsaV3_3G039800 Cucumis sativus L.
CSS0006862 Camellia sinensis var. sinensis
DCAR_013510 Daucus carota
DCAR_020631 Daucus carota
Dinv04566 Davidia involucrata
Dinv04570 Davidia involucrata
Duzib093G1563 Durio zibethinus
ECA236G4036 Erigeron canadensis
ECA247G1148 Erigeron canadensis
EL10Ac3g07345 Beta vulgaris
EL10Ac5g10843 Beta vulgaris
Eucgr.A02178 Eucalyptus grandis
Eucgr.K01691 Eucalyptus grandis
FAN19G2869 Fragaria x ananassa
FAN23G1710 Fragaria x ananassa
FAN23G2522 Fragaria x ananassa
FAN26G0591 Fragaria x ananassa
FvH4_1g29140 Fragaria vesca
Glyma.03G003900 Glycine max
Glyma.03G004000 Glycine max
Glyma.03G120000 Glycine max
Glyma.03G120100 Glycine max
Glyma.19G122100 Glycine max
Glyma.19G124500 Glycine max
Glyma.19G124600 Glycine max
Gohir.A01G192500 Gossypium hirsutum
Gohir.D01G177400 Gossypium hirsutum
Gorai.002G225800 Gossypium raimondii
GSVIVG01025847001 Vitis vinifera
HanXRQChr05g0130491 Helianthus annuus
HanXRQChr10g0298551 Helianthus annuus
HanXRQChr11g0345371 Helianthus annuus
HanXRQChr13g0424821 Helianthus annuus
Haze_20308 Corylus avellana
Hma1.2p1_0219F.1_g092910 Hydrangea macrophylla
HPP92_014343 Vanilla planifolia
HPP92_015316 Vanilla planifolia
Hund09332 Selenicereus undatus
Hund09403 Selenicereus undatus
Hund09404 Selenicereus undatus
Hund11280 Selenicereus undatus
Hund11283 Selenicereus undatus
Hund19060 Selenicereus undatus
Lalb_Chr08g0239981 Lupinus albus
Lalb_Chr14g0365361 Lupinus albus
Lalb_Chr22g0358201 Lupinus albus
Lalb_Chr22g0358211 Lupinus albus
Lalb_Chr22g0358221 Lupinus albus
Lalb_Chr22g0358231 Lupinus albus
Lalb_Chr22g0358251 Lupinus albus
Lj1C1000G13 Lonicera japonica
Lj1C1079G5 Lonicera japonica
Lj1g0003561 Lotus japonicus
Lj1g0007554 Lotus japonicus
Lj1g0011085 Lotus japonicus
Lj1g0015444 Lotus japonicus
Lj4g0016335 Lotus japonicus
Lsat_1_v5_gn_0_9721 Lactuca sativa
Lsat_1_v5_gn_8_109421 Lactuca sativa
Lsat_1_v5_gn_8_148361 Lactuca sativa
Lsat_1_v5_gn_9_32321 Lactuca sativa
Manes.09G074500 Manihot esculenta
Mapoly0051s0113 Marchantia polymorpha
MBI19_g25014_MAGBIO Magnolia biondii
MD12G1112100 Malus domestica
MD14G1101200 Malus domestica
Medtr0176s0070 Medicago truncatula
Medtr0176s0080 Medicago truncatula
Medtr2g090585 Medicago truncatula
Medtr6g025730 Medicago truncatula
Medtr6g025790 Medicago truncatula
Medtr7g087880 Medicago truncatula
Medtr7g087890 Medicago truncatula
Medtr7g087960 Medicago truncatula
Medtr7g088410 Medicago truncatula
Medtr7g088420 Medicago truncatula
Medtr7g088440 Medicago truncatula
Medtr7g088470 Medicago truncatula
MELO3C009722.2 Cucumis melo
Migut.J01561 Erythranthe guttata
Migut.K00170 Erythranthe guttata
MSTRG.26189 Avicennia marina
MSTRG.6292 Avicennia marina
Nitab4.5_0000062g0330 Nicotiana tabacum
Nitab4.5_0001270g0200 Nicotiana tabacum
Nitab4.5_0002439g0110 Nicotiana tabacum
Nitab4.5_0009086g0010 Nicotiana tabacum
Nn7g37117 Nelumbo nucifera
Oeu020943.1 Olea europaea
Oeu042070.1 Olea europaea
Oeu047187.1 Olea europaea
Oeu047188.1 Olea europaea
Oeu060753.1 Olea europaea
Os03g0320100 Oryza sativa ssp. japonica
Os04g0274250 Oryza sativa ssp. japonica
Os07g0686900 Oryza sativa ssp. japonica
Os11g0131900 Oryza sativa ssp. japonica
Os11g0132000 Oryza sativa ssp. japonica
Os11g0132600 Oryza sativa ssp. japonica
Os12g0128700 Oryza sativa ssp. japonica
Os12g0128800 Oryza sativa ssp. japonica
Os12g0129300 Oryza sativa ssp. japonica
Os12g0129350 Oryza sativa ssp. japonica
Peaxi162Scf00003g05317 Petunia axillaris
Peaxi162Scf00153g01324 Petunia axillaris
PGR042G1250 Punica granatum
PGSC0003DMG400007203 Solanum tuberosum
Phvul.001G115700 Phaseolus vulgaris
Phvul.001G116100 Phaseolus vulgaris
Phvul.001G116150 Phaseolus vulgaris
Phvul.001G116200 Phaseolus vulgaris
Phvul.001G116300 Phaseolus vulgaris
Phvul.005G037800 Phaseolus vulgaris
Potri.006G027700 Populus trichocarpa
Potri.016G025500 Populus trichocarpa
Pp3c16_11320 Physcomitrium patens
Pp3c6_10310 Physcomitrium patens
Prupe.7G021200 Prunus persica
Prupe.7G021300 Prunus persica
Prupe.7G021500 Prunus persica
Psat0s7975g0040 Pisum sativum
Psat2g110640 Pisum sativum
Psat2g110680 Pisum sativum
Psat2g110720 Pisum sativum
Psat3g082480 Pisum sativum
Psat3g084400 Pisum sativum
Psat3g084440 Pisum sativum
Psat3g084480 Pisum sativum
Psat6g091160 Pisum sativum
Psat6g091200 Pisum sativum
Psat6g202000 Pisum sativum
PSO339G1746 Papaver somniferum
PSO384G2233 Papaver somniferum
QL07p014564 Quercus lobata
RcHm_v2.0_Chr3g0494401 Rosa chinensis
Rhsim04G0118300 Rhododendron simsii
Rhsim04G0118700 Rhododendron simsii
Rhsim05G0130000 Rhododendron simsii
Sabra06G0020500 Salix brachista
Sabra15G0054900 Salix brachista
Sabra16G0031200 Salix brachista
Sabra16G0031300 Salix brachista
Sabra16G0031400 Salix brachista
Sabra16G0031600 Salix brachista
Sabra16G0296000 Salix brachista
Sabra18G0038700 Salix brachista
SalBow1G0245 Salvia bowleyana
SalBow1G7528 Salvia bowleyana
SalBow6G0023 Salvia bowleyana
Sc04g0002120 Simmondsia chinensis
Sc04g0002140 Simmondsia chinensis
Sc04g0002150 Simmondsia chinensis
Sc12g0005610 Simmondsia chinensis
Sc13g0000810 Simmondsia chinensis
Sc19g0007870 Simmondsia chinensis
Sed0023153 Sechium edule
SEGI_01275 Sequoiadendron giganteum
SEGI_04014 Sequoiadendron giganteum
SEGI_20220 Sequoiadendron giganteum
SEGI_25212 Sequoiadendron giganteum
SEGI_32938 Sequoiadendron giganteum
SEGI_33491 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30557 Striga asiatica
SGA_v2.0_scaffold106G30561 Striga asiatica
SGA_v2.0_scaffold157G37409 Striga asiatica
SGA_v2.0_scaffold360G49866 Striga asiatica
SGA_v2.0_scaffold66G22314 Striga asiatica
SHI24503 Sapria himalayana
SHI24506 Sapria himalayana
SMO174G0165 Selaginella moellendorffii
SMO244G0069 Selaginella moellendorffii
Solyc10g077080.3 Solanum lycopersicum
Solyc10g081120.3 Solanum lycopersicum
Sopen10g028760 Solanum pennellii
Sopen10g031620 Solanum pennellii
Sp2g21610 Schrenkiella parvula
Sp3g09070 Schrenkiella parvula
Sp6g37780 Schrenkiella parvula
TAR369G0035 Trochodendron aralioides
TAR369G0786 Trochodendron aralioides
THA.LOC104816491 Tarenaya hassleriana
THA.LOC104826885 Tarenaya hassleriana
Thecc.05G132300 Theobroma cacao
Thhalv10005284m.g Eutrema salsugineum
Thhalv10015637m.g Eutrema salsugineum
Thhalv10020209m.g Eutrema salsugineum
TPR.G18050 Trifolium pratense
TPR.G188 Trifolium pratense
TPR.G23669 Trifolium pratense
TPR.G23687 Trifolium pratense
TPR.G23702 Trifolium pratense
TPR.G27971 Trifolium pratense
TPR.G27973 Trifolium pratense
TPR.G27994 Trifolium pratense
TPR.G31046 Trifolium pratense
TPR.G40217 Trifolium pratense
TPR.G6394 Trifolium pratense
TPR.G6458 Trifolium pratense
TWI53G1817 Tripterygium wilfordii
TWI74G0822 Tripterygium wilfordii
unitig_21.g20670 Utricularia gibba
unitig_37.g12775 Utricularia gibba
unitig_46.g18438 Utricularia gibba
vmacro08970 Vaccinium macrocarpon
VMungo1383G0630 Vigna mungo
VMungo1383G0763 Vigna mungo
VMungo1383G0835 Vigna mungo
VMungo1383G1020 Vigna mungo
VMungo1383G2623 Vigna mungo
VMungo1383G3126 Vigna mungo
Zm00001eb015240 Zea mays
Zm00001eb046060 Zea mays
Zm00001eb088900 Zea mays
Zm00001eb111760 Zea mays
Zm00001eb115660 Zea mays
Zm00001eb115670 Zea mays
Zm00001eb163530 Zea mays
Zm00001eb168050 Zea mays
Zm00001eb196100 Zea mays
Zm00001eb324380 Zea mays
Zm00001eb345710 Zea mays
Zm00001eb439680 Zea mays

User provided reference genes

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