Gene: TPR.G6394

General Information

Structural Information

Species Trifolium pratense
Gene Identifier TPR.G6394
Transcript Identifier TPR.T6620
Gene Type Coding gene
Location Tp57577_TGAC_v2_LG7 : 30007938-30009353 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002043
#Genes/#Species 325/97
Phylogenetic origin

ID ORTHO05D002207
#Genes/#Species 307/97
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Tp57577_TGAC_v2_mRNA6620.v2
id Tp57577_TGAC_v2_gene6394.v2
pacid 35955426

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0046373	IEA	InterPro	L-arabinose metabolic process
GO:0045493	ISO	PLAZA Integrative Orthology	xylan catabolic process	AT3G10740

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0046556	IEA	InterPro	alpha-L-arabinofuranosidase activity
GO:0009044	ISO	PLAZA Integrative Orthology	xylan 1,4-beta-xylosidase activity	AT3G10740

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0048046	ISO	PLAZA Integrative Orthology	apoplast	AT3G10740
GO:0005773	ISO	PLAZA Integrative Orthology	vacuole	AT3G10740

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR010720	Alpha-L-arabinofuranosidase, C-terminal
IPR017853	Glycoside hydrolase superfamily
IPR013780	Glycosyl hydrolase, all-beta

Mapman id	Description
21.3.2.2.4.1	Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (ASD)