Gene: Lsat_1_v5_gn_9_32321

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_9_32321
  • Transcript Identifier Lsat_1_v5_gn_9_32321.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_9 : 34600079-34616674 : negative

Gene Family Information

  • ID HOM05D002043
  • #Genes/#Species 325/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_9_32321.v5
  • pacid 38924627

Descriptions

  • Description PF04818//PF06964 - RNA polymerase II-binding domain. (CTD_bind) // Alpha-L-arabinofuranosidase C-terminus (Alpha-L-AF_C)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046373
IEA
InterProL-arabinose metabolic process
GO:0045493
ISO
PLAZA Integrative Orthologyxylan catabolic process AT3G10740

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046556
IEA
InterProalpha-L-arabinofuranosidase activity
GO:0009044
ISO
PLAZA Integrative Orthologyxylan 1,4-beta-xylosidase activity AT3G10740

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT3G10740
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G10740

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006569 CID domain
IPR013780 Glycosyl hydrolase, all-beta
IPR008942 ENTH/VHS
IPR008979 Galactose-binding-like domain superfamily
IPR010720 Alpha-L-arabinofuranosidase, C-terminal
IPR017853 Glycoside hydrolase superfamily
Mapman id Description
21.3.2.2.4.1 Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (ASD)