Gene: Sopen10g028760

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g028760
  • Transcript Identifier Sopen10g028760.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 76679259-76684620 : positive

Gene Family Information

  • ID HOM05D002043
  • #Genes/#Species 325/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g028760.1

Descriptions

  • Description Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 51 of glycoside hydrolases. It may be involved in cell wall modification. | alpha-L-arabinofuranosidase 1 (ASD1) | FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xylan 1,4-beta-xylosidase activity, alpha-N-arabinofuranosidase activity | INVOLVED IN: xylan catabolic process | LOCATED IN: apoplast, vacuole, plant-type cell wall | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Alpha-L-arabinofuranosidase, C-terminal , Glycoside hydrolase, catalytic core , Galactose-binding domain-like | BEST Arabidopsis thaliana protein match is: alpha-L-arabinofuranosidase 2
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046373
IEA
InterProL-arabinose metabolic process
GO:0045493
ISO
PLAZA Integrative Orthologyxylan catabolic process AT3G10740

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046556
IEA
InterProalpha-L-arabinofuranosidase activity
GO:0009044
ISO
PLAZA Integrative Orthologyxylan 1,4-beta-xylosidase activity AT3G10740

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT3G10740
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G10740

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008979 Galactose-binding-like domain superfamily
IPR010720 Alpha-L-arabinofuranosidase, C-terminal
IPR017853 Glycoside hydrolase superfamily
IPR013780 Glycosyl hydrolase, all-beta
Mapman id Description
21.3.2.2.4.1 Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (ASD)