Gene: PGR042G1250

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR042G1250
  • Transcript Identifier PGR042G1250.02
  • Gene Type Coding gene
  • Location NC_045130.1 : 33197165-33202533 : negative

Gene Family Information

  • ID HOM05D002043
  • #Genes/#Species 325/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031393669.1
  • name LOC116205268
  • name XM_031537809.1
  • id gene-LOC116205268
  • uniprot A0A2I0JRM7

Descriptions

  • product alpha-L-arabinofuranosidase 1, transcript variant X1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046373
IEA
GOA DatabaseL-arabinose metabolic process
GO:0046373
IEA
InterProL-arabinose metabolic process
GO:0045493
ISO
PLAZA Integrative Orthologyxylan catabolic process AT3G10740

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046556
IEA
GOA Databasealpha-L-arabinofuranosidase activity
GO:0046556
IEA
InterProalpha-L-arabinofuranosidase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0009044
ISO
PLAZA Integrative Orthologyxylan 1,4-beta-xylosidase activity AT3G10740

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT3G10740
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G10740

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010720 Alpha-L-arabinofuranosidase, C-terminal
IPR008979 Galactose-binding-like domain superfamily
IPR017853 Glycoside hydrolase superfamily
IPR013780 Glycosyl hydrolase, all-beta
Mapman id Description
21.3.2.2.4.1 Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (ASD)