Gene: Potri.016G025500
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.016G025500
- Transcript Identifier Potri.016G025500.1
- Gene Type Coding gene
- Location Chr16 : 1427625-1433071 : positive
Gene Family Information
- ID HOM05D002043
- #Genes/#Species 325/97
- Phylogenetic origin
- ID ORTHO05D002207
- #Genes/#Species 307/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.016G025500.v4.1
- pacid 42809314
- synonym gw1.XVI.1041.1
Descriptions
- Description K01209 - alpha-N-arabinofuranosidase (E3.2.1.55, abfA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046373 | IEA | InterPro | L-arabinose metabolic process | |
| GO:0045493 | ISO | PLAZA Integrative Orthology | xylan catabolic process | AT3G10740 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046556 | IEA | InterPro | alpha-L-arabinofuranosidase activity | |
| GO:0009044 | ISO | PLAZA Integrative Orthology | xylan 1,4-beta-xylosidase activity | AT3G10740 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT3G10740 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT3G10740 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.3.2.2.4.1 | Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (ASD) |