Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p20690 Brassica napus
A08p35180 Brassica napus
A09p65920 Brassica napus
A09p68050 Brassica napus
Aa31LG2G7390 Aethionema arabicum
Aa31LG5G8630 Aethionema arabicum
Aa31sc314G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2968 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3830 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1334 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.75 Anthoceros agrestis
Actinidia07284 Actinidia chinensis
Actinidia19875 Actinidia chinensis
Actinidia24258 Actinidia chinensis
Actinidia31897 Actinidia chinensis
Actinidia37501 Actinidia chinensis
Ah.05g179340 Amaranthus hybridus
Ah.15g092110 Amaranthus hybridus
AL1G18820 Arabidopsis lyrata
AL4G21100 Arabidopsis lyrata
AL5G12570 Arabidopsis lyrata
AL6G52060 Arabidopsis lyrata
AL7G47160 Arabidopsis lyrata
Aqoxy1G01101 Aquilegia oxysepala
Aqoxy1G01953 Aquilegia oxysepala
Aqoxy2G00626 Aquilegia oxysepala
Aqoxy5G02832 Aquilegia oxysepala
Aqoxy5G02833 Aquilegia oxysepala
Aqoxy5G02834 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.41IR6N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8UN484 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AY0VQT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JS7C8X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N3HM5N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q3UIYI Arachis hypogaea
AT1G08410 Arabidopsis thaliana
AT1G42615 Arabidopsis thaliana
AT2G02955 Arabidopsis thaliana
AT2G27200 Arabidopsis thaliana
AT4G01335 Arabidopsis thaliana
AT4G01340 Arabidopsis thaliana
ATR0006G002 Amborella trichopoda
ATR0782G208 Amborella trichopoda
Atru.chr11.1785 Acer truncatum
Atru.chr11.1786 Acer truncatum
Atru.chr11.1787 Acer truncatum
Atru.chr3.3098 Acer truncatum
Atru.chr3.3101 Acer truncatum
AUR62001563 Chenopodium quinoa
AUR62005788 Chenopodium quinoa
AUR62008859 Chenopodium quinoa
AUR62020220 Chenopodium quinoa
AUR62028773 Chenopodium quinoa
BcaB03g13337 Brassica carinata
BcaB06g28123 Brassica carinata
BcaC02g08272 Brassica carinata
BcaC03g16925 Brassica carinata
BcaC06g34029 Brassica carinata
BcaC07g38386 Brassica carinata
BcaC07g41945 Brassica carinata
BcaC07g42209 Brassica carinata
BcaC07g42212 Brassica carinata
BcaC07g42533 Brassica carinata
BolC4t27178H Brassica oleracea
BolC8t48823H Brassica oleracea
BolC8t52532H Brassica oleracea
BolC8t52776H Brassica oleracea
BraA04t17642Z Brassica rapa
BraA08t35427Z Brassica rapa
BraA09t41936Z Brassica rapa
BraA09t42140Z Brassica rapa
C02p48260 Brassica napus
C04p56520 Brassica napus
C08p11420 Brassica napus
C08p50020 Brassica napus
C08p52490 Brassica napus
CAN.G439.30 Capsicum annuum
CANSAT54G0076 Cannabis sativa
CANSAT54G1389 Cannabis sativa
CARHR008290 Cardamine hirsuta
CARHR119700 Cardamine hirsuta
CARHR145370 Cardamine hirsuta
CARHR145380 Cardamine hirsuta
CARHR212720 Cardamine hirsuta
CARHR289080 Cardamine hirsuta
Carub.0001s0776 Capsella rubella
Carub.0004s0777 Capsella rubella
Carub.0005s0183 Capsella rubella
Carub.0006s3640 Capsella rubella
Ca_02972_v3 Cicer arietinum L.
Ca_20931_v3 Cicer arietinum L.
CBR_g30180 Chara braunii
CBR_g32036 Chara braunii
Cc01_g07790 Coffea canephora
Cc09_g03970 Coffea canephora
CDE06G0259 Ceratophyllum demersum
CDE06G2098 Ceratophyllum demersum
CDE07G0941 Ceratophyllum demersum
Cfa008981 Carpinus fangiana
Cfa008983 Carpinus fangiana
Cfa010182 Carpinus fangiana
Cfa024445 Carpinus fangiana
Ciclev10028074m.g Citrus clementina
Ciclev10030768m.g Citrus clementina
CiPaw.05G135300 Carya illinoinensis
CiPaw.13G129100 Carya illinoinensis
ClCG01G010890 Citrullus lanatus
ClCG04G002140 Citrullus lanatus
ClCG11G010950 Citrullus lanatus
COL.COLO4_23013 Corchorus olitorius
COL.COLO4_25404 Corchorus olitorius
Cpa.g.sc103.19 Carica papaya
Cpa.g.sc128.24 Carica papaya
Cre13.g577800 Chlamydomonas reinhardtii
Cre16.g680944 Chlamydomonas reinhardtii
CsaV3_1G015690 Cucumis sativus L.
CsaV3_2G009530 Cucumis sativus L.
CsaV3_4G030600 Cucumis sativus L.
CSS0030030 Camellia sinensis var. sinensis
CSS0034246 Camellia sinensis var. sinensis
CSS0044690 Camellia sinensis var. sinensis
DCAR_006456 Daucus carota
DCAR_007151 Daucus carota
Dinv16646 Davidia involucrata
Dinv18851 Davidia involucrata
Dinv33543 Davidia involucrata
Duzib168G1815 Durio zibethinus
Duzib170G0073 Durio zibethinus
Duzib251G0871 Durio zibethinus
ECA234G0637 Erigeron canadensis
ECA238G3826 Erigeron canadensis
ECA248G0899 Erigeron canadensis
EL10Ac6g13205 Beta vulgaris
EL10Ac7g16285 Beta vulgaris
EL10Ac9g22126 Beta vulgaris
EL10As5g23508 Beta vulgaris
Eucgr.B03444 Eucalyptus grandis
Eucgr.B03445 Eucalyptus grandis
Eucgr.J00579 Eucalyptus grandis
FAN11G2867 Fragaria x ananassa
FAN21G2649 Fragaria x ananassa
FAN21G2899 Fragaria x ananassa
FAN25G3456 Fragaria x ananassa
FAN25G3604 Fragaria x ananassa
FvH4_3g26290 Fragaria vesca
FvH4_3g26291 Fragaria vesca
Glyma.07G176900 Glycine max
Glyma.11G111300 Glycine max
Glyma.11G175746 Glycine max
Glyma.12G037602 Glycine max
Glyma.12G095400 Glycine max
Glyma.12G189600 Glycine max
Glyma.13G312200 Glycine max
Gohir.A05G183600 Gossypium hirsutum
Gohir.A09G100300 Gossypium hirsutum
Gohir.D05G304800 Gossypium hirsutum
Gohir.D09G099700 Gossypium hirsutum
Gohir.D09G099733 Gossypium hirsutum
Gohir.D09G099766 Gossypium hirsutum
Gorai.006G116700 Gossypium raimondii
Gorai.009G324500 Gossypium raimondii
GSVIVG01019982001 Vitis vinifera
GSVIVG01037592001 Vitis vinifera
HanXRQChr05g0145521 Helianthus annuus
HanXRQChr08g0236561 Helianthus annuus
HanXRQChr09g0255131 Helianthus annuus
HanXRQChr11g0324901 Helianthus annuus
HanXRQChr14g0431711 Helianthus annuus
HanXRQChr14g0444911 Helianthus annuus
Haze_12013 Corylus avellana
Haze_23572 Corylus avellana
Haze_26317 Corylus avellana
Hma1.2p1_0101F.1_g049570 Hydrangea macrophylla
Hma1.2p1_0265F.1_g106750 Hydrangea macrophylla
HPP92_017674 Vanilla planifolia
HPP92_017697 Vanilla planifolia
HPP92_017736 Vanilla planifolia
HPP92_017737 Vanilla planifolia
HPP92_021577 Vanilla planifolia
HPP92_028931 Vanilla planifolia
Hund05880 Selenicereus undatus
Hund18799 Selenicereus undatus
Hund25529 Selenicereus undatus
Hund25598 Selenicereus undatus
Lalb_Chr03g0028461 Lupinus albus
Lalb_Chr14g0368981 Lupinus albus
Lalb_Chr19g0136201 Lupinus albus
Lalb_Chr19g0136211 Lupinus albus
Lj2A953T33 Lonicera japonica
Lj2A953T34 Lonicera japonica
Lj3g0010541 Lotus japonicus
Lj3g0025777 Lotus japonicus
Lj8A318G47 Lonicera japonica
Lsat_1_v5_gn_2_35440 Lactuca sativa
Lsat_1_v5_gn_4_55321 Lactuca sativa
Lsat_1_v5_gn_5_156781 Lactuca sativa
Lsat_1_v5_gn_8_100701 Lactuca sativa
Manes.01G185700 Manihot esculenta
Manes.04G062600 Manihot esculenta
Mapoly0045s0113 Marchantia polymorpha
Mapoly0075s0087 Marchantia polymorpha
MBI12_g38623_MAGBIO Magnolia biondii
MBI12_g38624_MAGBIO Magnolia biondii
MBI19_g09828_MAGBIO Magnolia biondii
MCO03G550 Micromonas commoda
MCO05G546 Micromonas commoda
MCO12G197 Micromonas commoda
MD04G1025400 Malus domestica
MD05G1034700 Malus domestica
MD10G1037500 Malus domestica
Medtr4g050490 Medicago truncatula
Medtr4g057650 Medicago truncatula
Medtr4g071660 Medicago truncatula
Medtr4g071850 Medicago truncatula
Medtr5g067430 Medicago truncatula
MELO3C008752.2 Cucumis melo
MELO3C008925.2 Cucumis melo
MELO3C026106.2 Cucumis melo
Migut.F02100 Erythranthe guttata
Migut.G01069 Erythranthe guttata
Migut.I00421 Erythranthe guttata
Migut.N02439 Erythranthe guttata
MSTRG.17675 Avicennia marina
MSTRG.27418 Avicennia marina
Nitab4.5_0000428g0180 Nicotiana tabacum
Nitab4.5_0002792g0050 Nicotiana tabacum
Nitab4.5_0004699g0020 Nicotiana tabacum
Nitab4.5_0007630g0020 Nicotiana tabacum
Nitab4.5_0007649g0010 Nicotiana tabacum
Nn4g23157 Nelumbo nucifera
Nn6g34638 Nelumbo nucifera
Oeu007681.1 Olea europaea
Oeu037938.2 Olea europaea
Oeu051473.1 Olea europaea
Os03g0647500 Oryza sativa ssp. japonica
Os05g0352700 Oryza sativa ssp. japonica
Os05g0580800 Oryza sativa ssp. japonica
Os07g0609550 Oryza sativa ssp. japonica
Os12g0510000 Oryza sativa ssp. japonica
Os12g0618300 Oryza sativa ssp. japonica
Peaxi162Scf00217g00713 Petunia axillaris
Peaxi162Scf00342g00711 Petunia axillaris
Peaxi162Scf00342g00712 Petunia axillaris
Peaxi162Scf00429g00122 Petunia axillaris
PGR102G2417 Punica granatum
PGR119G1622 Punica granatum
PGSC0003DMG400002020 Solanum tuberosum
PGSC0003DMG400003001 Solanum tuberosum
PGSC0003DMG401018705 Solanum tuberosum
Phvul.011G039300 Phaseolus vulgaris
Phvul.011G099700 Phaseolus vulgaris
Potri.009G017000 Populus trichocarpa
Potri.010G169500 Populus trichocarpa
Pp3c15_9350 Physcomitrium patens
Pp3c3_21040 Physcomitrium patens
Pp3c9_8400 Physcomitrium patens
PRCOL_00000548 Prasinoderma coloniale
PRCOL_00001880 Prasinoderma coloniale
Prupe.1G174900 Prunus persica
Prupe.1G535500 Prunus persica
Psat7g139200 Pisum sativum
Psat7g204840 Pisum sativum
PSO017G3571 Papaver somniferum
PSO063G4641 Papaver somniferum
PSO339G1785 Papaver somniferum
PSO384G2941 Papaver somniferum
PSO513G0179 Papaver somniferum
QL01p019440 Quercus lobata
QL03p063393 Quercus lobata
QL03p063402 Quercus lobata
QL03p064038 Quercus lobata
QL03p064050 Quercus lobata
RcHm_v2.0_Chr5g0048631 Rosa chinensis
RcHm_v2.0_Chr5g0048641 Rosa chinensis
RcHm_v2.0_Chr5g0048681 Rosa chinensis
RcHm_v2.0_Chr7g0220011 Rosa chinensis
RcHm_v2.0_Chr7g0220021 Rosa chinensis
Rhsim12G0063800 Rhododendron simsii
Rhsim13G0196900 Rhododendron simsii
Sabra09G0009700 Salix brachista
Sabra10G0129300 Salix brachista
SalBow1G3615 Salvia bowleyana
SalBow3G3263 Salvia bowleyana
Sc11g0001930 Simmondsia chinensis
Sc21g0006750 Simmondsia chinensis
Sed0003814 Sechium edule
Sed0009678 Sechium edule
Sed0023260 Sechium edule
SEGI_17598 Sequoiadendron giganteum
SEGI_17983 Sequoiadendron giganteum
SEGI_23026 Sequoiadendron giganteum
SEGI_28471 Sequoiadendron giganteum
SEGI_33563 Sequoiadendron giganteum
SGA_v2.0_scaffold268G46203 Striga asiatica
SGA_v2.0_scaffold58G20462 Striga asiatica
SHI13475 Sapria himalayana
SMO174G0010 Selaginella moellendorffii
SMO200G0068 Selaginella moellendorffii
SMO239G0039 Selaginella moellendorffii
Solyc09g007120.4 Solanum lycopersicum
Solyc11g071540.2 Solanum lycopersicum
Solyc11g071910.2 Solanum lycopersicum
Sopen09g001990 Solanum pennellii
Sopen11g029230 Solanum pennellii
Sopen11g029580 Solanum pennellii
Sp1g07060 Schrenkiella parvula
Sp2g13990 Schrenkiella parvula
Sp4g10000 Schrenkiella parvula
Sp7g05500 Schrenkiella parvula
TAR629G1399 Trochodendron aralioides
TAR636G0458 Trochodendron aralioides
THA.LOC104805159 Tarenaya hassleriana
THA.LOC104826449 Tarenaya hassleriana
Thecc.02G346500 Theobroma cacao
Thecc.09G271000 Theobroma cacao
Thhalv10001955m.g Eutrema salsugineum
Thhalv10004418m.g Eutrema salsugineum
Thhalv10007194m.g Eutrema salsugineum
Thhalv10027666m.g Eutrema salsugineum
TPR.G16225 Trifolium pratense
TPR.G27077 Trifolium pratense
TPR.G4623 Trifolium pratense
TWI53G0339 Tripterygium wilfordii
unitig_60.g25620 Utricularia gibba
unitig_699.g19173 Utricularia gibba
vmacro01166 Vaccinium macrocarpon
vmacro01260 Vaccinium macrocarpon
vmacro03951 Vaccinium macrocarpon
vmacro19783 Vaccinium macrocarpon
VMungo1127G0715 Vigna mungo
VMungo1127G1842 Vigna mungo
Zm00001eb031980 Zea mays
Zm00001eb284870 Zea mays

User provided reference genes

Program Settings