Gene: FAN11G2867

General Information

Structural Information

Species Fragaria x ananassa
Gene Identifier FAN11G2867
Transcript Identifier FAN11G2867.1
Gene Type Coding gene
Location Fvb3-4 : 14145173-14155100 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001988
#Genes/#Species 333/100
Phylogenetic origin

ID ORTHO05D006298
#Genes/#Species 144/97
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id maker-Fvb3-4-snap-gene-141.22.v1.0.a1
pacid 50535929

Descriptions

Short descriptions
Ortholog descriptions

Description PF01926//PF11781 - 50S ribosome-binding GTPase (MMR_HSR1) // RNA polymerase I-specific transcription initiation factor Rrn7 (RRN7)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0048366	ISO	PLAZA Integrative Orthology	leaf development	AT1G08410
GO:0042254	ISO	PLAZA Integrative Orthology	ribosome biogenesis	AT1G08410
GO:2000012	ISO	PLAZA Integrative Orthology	regulation of auxin polar transport	AT1G08410
GO:0006364	ISO	PLAZA Integrative Orthology	rRNA processing	AT1G08410
GO:0048825	ISO	PLAZA Integrative Orthology	cotyledon development	AT1G08410
GO:0090070	ISO	PLAZA Integrative Orthology	positive regulation of ribosome biogenesis	AT1G08410

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005525	IEA	InterPro	GTP binding
GO:0003924	IEA	InterPro	GTPase activity
GO:0043022	ISO	PLAZA Integrative Orthology	ribosome binding	AT1G08410

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G08410
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT2G27200
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT1G08410

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR006073	GTP binding domain
IPR043358	Ras GTPase GNL1-like
IPR023179	GTP-binding protein, orthogonal bundle domain superfamily
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Mapman id	Description
15.2.3	RNA biosynthesis.RNA polymerase I-dependent transcription.transcription initiation factor (CCG/MEE12)
17.1.2.2.3.1	Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.60S ribosomal subunit cytoplasmic maturation.ribosome assembly GTPase (LSG1)