Gene: Cc09_g03970
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc09_g03970
- Transcript Identifier Cc09_g03970.1
- Gene Type Coding gene
- Location chr9 : 3358386-3362103 : positive
Gene Family Information
- ID HOM05D001988
- #Genes/#Species 333/100
- Phylogenetic origin
- ID ORTHO05D004985
- #Genes/#Species 166/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB Q5W770
- UniProtKB F6HPR5
- UniProtKB Q94GD0
- UniProtKB B8AX23
- UniProtKB Q5XVF0
- UniProtKB A5ACR3
- id GSCOCG00017481001
Descriptions
- Description Putative TATA box-binding protein-associated factor RNA polymerase I subunit B
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001188 | IEA | InterPro | RNA polymerase I preinitiation complex assembly | |
| GO:0006360 | IEA | InterPro | transcription by RNA polymerase I | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT2G02955 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001164 | IEA | InterPro | RNA polymerase I core promoter sequence-specific DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G02955 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070860 | IEA | InterPro | RNA polymerase I core factor complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR033599 | RNA polymerase I transcription initiation factor TAF1B/Rrn7 |
| Mapman id | Description |
|---|---|
| 15.2.3 | RNA biosynthesis.RNA polymerase I-dependent transcription.transcription initiation factor (CCG/MEE12) |