Gene: AT1G42615
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G42615
- Transcript Identifier AT1G42615.1
- Gene Type Coding gene
- Location Chr1 : 16037606-16038455 : positive
Gene Family Information
- ID HOM05D001988
- #Genes/#Species 333/100
- Phylogenetic origin
- ID ORTHO05D004985
- #Genes/#Species 166/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G42615.1
- uniprot A0A1P8AW93
Descriptions
- Description TATA box-binding protein associated factor RNA polymerase I subunit B
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006360 | IEA | GOA Database | transcription by RNA polymerase I | |
| GO:0006360 | IEA | InterPro | transcription by RNA polymerase I | |
| GO:0001188 | IEA | Gene Ontology | RNA polymerase I preinitiation complex assembly | |
| GO:0001188 | IEA | InterPro | RNA polymerase I preinitiation complex assembly | |
| GO:0042790 | IBA | Gene Ontology | nucleolar large rRNA transcription by RNA polymerase I | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0001164 | IEA | GOA Database | RNA polymerase I core promoter sequence-specific DNA binding | |
| GO:0001164 | IBA | Gene Ontology | RNA polymerase I core promoter sequence-specific DNA binding | 1 |
| GO:0001164 | IEA | InterPro | RNA polymerase I core promoter sequence-specific DNA binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070860 | IEA | GOA Database | RNA polymerase I core factor complex | |
| GO:0070860 | IBA | Gene Ontology | RNA polymerase I core factor complex | 1 |
| GO:0070860 | IEA | InterPro | RNA polymerase I core factor complex | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005730 | IEA | GOA Database | nucleolus | |
| GO:0005668 | IBA | Gene Ontology | RNA polymerase transcription factor SL1 complex | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR033599 | RNA polymerase I transcription initiation factor TAF1B/Rrn7 |
| Mapman id | Description |
|---|---|
| 15.2.3 | RNA biosynthesis.RNA polymerase I-dependent transcription.transcription initiation factor (CCG/MEE12) |