Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p00050 Brassica napus
A06p10760 Brassica napus
A06p10770 Brassica napus
A08p31830 Brassica napus
A09p02260 Brassica napus
A09p61860 Brassica napus
Aa31LG1G29490 Aethionema arabicum
Aa31LG1G370 Aethionema arabicum
Aa31LG5G2520 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2895 Anthoceros agrestis
Actinidia00726 Actinidia chinensis
Actinidia04321 Actinidia chinensis
Actinidia20109 Actinidia chinensis
Actinidia20110 Actinidia chinensis
Actinidia21091 Actinidia chinensis
Actinidia24314 Actinidia chinensis
Actinidia24872 Actinidia chinensis
Ah.10g031000 Amaranthus hybridus
AL1G26720 Arabidopsis lyrata
AL4G47680 Arabidopsis lyrata
AL6G49990 Arabidopsis lyrata
Aqoxy2G03207 Aquilegia oxysepala
Aqoxy3G04108 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.45BME0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.535NIJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C5SZT3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IEB1S3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SPY99B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UA6S11 Arachis hypogaea
AT1G14710 Arabidopsis thaliana
AT2G48080 Arabidopsis thaliana
AT4G02940 Arabidopsis thaliana
ATR0598G328 Amborella trichopoda
ATR0626G147 Amborella trichopoda
ATR0626G355 Amborella trichopoda
ATR1101G054 Amborella trichopoda
Atru.chr11.742 Acer truncatum
Atru.chr5.1345 Acer truncatum
AUR62033696 Chenopodium quinoa
AUR62036781 Chenopodium quinoa
BcaB01g01996 Brassica carinata
BcaB02g06543 Brassica carinata
BcaB02g08734 Brassica carinata
BcaB03g13084 Brassica carinata
BcaC02g12559 Brassica carinata
BcaC04g24023 Brassica carinata
BcaC05g25390 Brassica carinata
BcaC05g25391 Brassica carinata
BcaC07g38756 Brassica carinata
BcaC07g41546 Brassica carinata
BNapus_Darmor_BZH_scaffold_188p00050 Brassica napus
BolC5t30010H Brassica oleracea
BolC8t49313H Brassica oleracea
BolC8t52102H Brassica oleracea
BolC9t53167H Brassica oleracea
BolSC55t61231H Brassica oleracea
BraA05t19001Z Brassica rapa
BraA06t24255Z Brassica rapa
BraA08t35105Z Brassica rapa
BraA09t35875Z Brassica rapa
BraA09t41553Z Brassica rapa
C05p12660 Brassica napus
C08p16870 Brassica napus
C08p45500 Brassica napus
C09p02360 Brassica napus
CAN.G1682.12 Capsicum annuum
CAN.G74.48 Capsicum annuum
CAN.G956.6 Capsicum annuum
CANSAT25G1252 Cannabis sativa
CANSAT78G1975 Cannabis sativa
CARHR015240 Cardamine hirsuta
CARHR143450 Cardamine hirsuta
CARHR143480 Cardamine hirsuta
CARHR251310 Cardamine hirsuta
Carub.0001s1449 Capsella rubella
Carub.0004s3079 Capsella rubella
Carub.0006s3414 Capsella rubella
Ca_08558_v3 Cicer arietinum L.
Ca_08592_v3 Cicer arietinum L.
Ca_10400_v3 Cicer arietinum L.
Ca_26277_v3 Cicer arietinum L.
Ca_26278_v3 Cicer arietinum L.
Cc01_g19860 Coffea canephora
Cc11_g05850 Coffea canephora
Cc11_g05860 Coffea canephora
CDE01G0066 Ceratophyllum demersum
CDE01G0281 Ceratophyllum demersum
CDE05G0840 Ceratophyllum demersum
CDE05G1857 Ceratophyllum demersum
CDE05G3562 Ceratophyllum demersum
CDE11G1172 Ceratophyllum demersum
CDE12G0811 Ceratophyllum demersum
Cfa006092 Carpinus fangiana
Cfa015068 Carpinus fangiana
Ciclev10014588m.g Citrus clementina
Ciclev10019581m.g Citrus clementina
CiPaw.05G158500 Carya illinoinensis
CiPaw.06G059100 Carya illinoinensis
CiPaw.07G095600 Carya illinoinensis
CiPaw.08G102500 Carya illinoinensis
ClCG07G006830 Citrullus lanatus
ClCG09G006800 Citrullus lanatus
COL.COLO4_27590 Corchorus olitorius
Cpa.g.sc1652.2 Carica papaya
Cpa.g.sc1652.3 Carica papaya
Cpa.g.sc2.133 Carica papaya
Cpa.g.sc2.134 Carica papaya
CsaV3_5G015320 Cucumis sativus L.
CsaV3_7G028530 Cucumis sativus L.
CSS0003370 Camellia sinensis var. sinensis
CSS0020059 Camellia sinensis var. sinensis
CSS0030499 Camellia sinensis var. sinensis
CSS0030661 Camellia sinensis var. sinensis
CSS0031376 Camellia sinensis var. sinensis
CSS0040766 Camellia sinensis var. sinensis
CSS0042953 Camellia sinensis var. sinensis
DCAR_002664 Daucus carota
DCAR_002759 Daucus carota
DCAR_004663 Daucus carota
DCAR_005825 Daucus carota
DCAR_018398 Daucus carota
DCAR_030305 Daucus carota
Dinv11050 Davidia involucrata
Dinv11262 Davidia involucrata
Dinv14367 Davidia involucrata
Dinv32968 Davidia involucrata
Duzib138G1638 Durio zibethinus
Duzib211G0588 Durio zibethinus
Duzib248G1225 Durio zibethinus
Duzib251G0549 Durio zibethinus
Duzib268G1728 Durio zibethinus
ECA233G2127 Erigeron canadensis
ECA236G2576 Erigeron canadensis
ECA247G2185 Erigeron canadensis
ECA248G1637 Erigeron canadensis
EL10Ac1g00641 Beta vulgaris
EL10Ac4g09036 Beta vulgaris
EL10Ac6g13930 Beta vulgaris
Eucgr.H01531 Eucalyptus grandis
Eucgr.J00953 Eucalyptus grandis
Eucgr.K03407 Eucalyptus grandis
FAN07G1141 Fragaria x ananassa
FAN12G1232 Fragaria x ananassa
FAN15G2410 Fragaria x ananassa
FAN17G2565 Fragaria x ananassa
FAN20G1822 Fragaria x ananassa
FAN22G0329 Fragaria x ananassa
FAN24G0303 Fragaria x ananassa
FAN27G2197 Fragaria x ananassa
FvH4_2g24110 Fragaria vesca
FvH4_4g33050 Fragaria vesca
Glyma.02G149900 Glycine max
Glyma.03G149900 Glycine max
Glyma.05G138600 Glycine max
Glyma.07G175300 Glycine max
Glyma.08G093800 Glycine max
Glyma.10G023900 Glycine max
Glyma.19G152900 Glycine max
Glyma.20G012100 Glycine max
Gohir.A03G112900 Gossypium hirsutum
Gohir.A05G305600 Gossypium hirsutum
Gohir.A08G070200 Gossypium hirsutum
Gohir.A11G119800 Gossypium hirsutum
Gohir.D02G137200 Gossypium hirsutum
Gohir.D05G308600 Gossypium hirsutum
Gohir.D08G078800 Gossypium hirsutum
Gohir.D11G124600 Gossypium hirsutum
Gorai.004G083800 Gossypium raimondii
Gorai.005G153400 Gossypium raimondii
Gorai.007G133500 Gossypium raimondii
Gorai.009G328700 Gossypium raimondii
GSVIVG01011068001 Vitis vinifera
GSVIVG01011601001 Vitis vinifera
HanXRQChr01g0003241 Helianthus annuus
HanXRQChr04g0117991 Helianthus annuus
HanXRQChr12g0366071 Helianthus annuus
HanXRQChr14g0431001 Helianthus annuus
HanXRQChr15g0470821 Helianthus annuus
Haze_04762 Corylus avellana
Haze_10821 Corylus avellana
Hma1.2p1_0095F.1_g047590 Hydrangea macrophylla
Hma1.2p1_0095F.1_g047600 Hydrangea macrophylla
Hma1.2p1_0257F.1_g103880 Hydrangea macrophylla
HPP92_001338 Vanilla planifolia
HPP92_011805 Vanilla planifolia
HPP92_016403 Vanilla planifolia
HPP92_016404 Vanilla planifolia
Hund05357 Selenicereus undatus
Lalb_Chr02g0142911 Lupinus albus
Lalb_Chr06g0163151 Lupinus albus
Lalb_Chr07g0187841 Lupinus albus
Lalb_Chr12g0209341 Lupinus albus
Lalb_Chr13g0293641 Lupinus albus
Lalb_Chr21g0306601 Lupinus albus
Lj1g0004913 Lotus japonicus
Lj2C1180G5 Lonicera japonica
Lj4g0010274 Lotus japonicus
Lj5g0016951 Lotus japonicus
Lj6C732G10 Lonicera japonica
Lj6C732T9 Lonicera japonica
Lsat_1_v5_gn_4_23981 Lactuca sativa
Lsat_1_v5_gn_5_187580 Lactuca sativa
Lsat_1_v5_gn_8_34741 Lactuca sativa
Lsat_1_v5_gn_8_55360 Lactuca sativa
Lsat_1_v5_gn_9_4580 Lactuca sativa
Manes.01G211000 Manihot esculenta
Manes.05G072300 Manihot esculenta
Manes.15G138000 Manihot esculenta
Manes.17G087400 Manihot esculenta
Mapoly0033s0001 Marchantia polymorpha
MBI13_g34562_MAGBIO Magnolia biondii
MBI17_g29027_MAGBIO Magnolia biondii
MBI19_g25217_MAGBIO Magnolia biondii
MD03G1271100 Malus domestica
MD11G1291700 Malus domestica
MD13G1016200 Malus domestica
MD13G1016300 Malus domestica
MD16G1013800 Malus domestica
Medtr1g033500 Medicago truncatula
Medtr1g033540 Medicago truncatula
Medtr1g089865 Medicago truncatula
Medtr7g094250 Medicago truncatula
MELO3C015868.2 Cucumis melo
MELO3C018268.2 Cucumis melo
Migut.A00070 Erythranthe guttata
Migut.D00254 Erythranthe guttata
Migut.E00507 Erythranthe guttata
MSTRG.13641 Avicennia marina
MSTRG.18209 Avicennia marina
MSTRG.21582 Avicennia marina
Nitab4.5_0000926g0130 Nicotiana tabacum
Nitab4.5_0001323g0070 Nicotiana tabacum
Nitab4.5_0002093g0020 Nicotiana tabacum
Nitab4.5_0005725g0020 Nicotiana tabacum
Nitab4.5_0006558g0030 Nicotiana tabacum
Nitab4.5_0010603g0030 Nicotiana tabacum
Nn1g02100 Nelumbo nucifera
Nn3g18452 Nelumbo nucifera
Nn4g24500 Nelumbo nucifera
Nn4g25301 Nelumbo nucifera
Nn4g26140 Nelumbo nucifera
Oeu001442.2 Olea europaea
Oeu011180.1 Olea europaea
Oeu011181.1 Olea europaea
Oeu044077.1 Olea europaea
Os03g0238800 Oryza sativa ssp. japonica
Os10g0116900 Oryza sativa ssp. japonica
Peaxi162Scf00337g00314 Petunia axillaris
Peaxi162Scf00783g00338 Petunia axillaris
Peaxi162Scf00941g00312 Petunia axillaris
PGR044G1936 Punica granatum
PGR119G0010 Punica granatum
PGR119G0774 Punica granatum
PGSC0003DMG400003805 Solanum tuberosum
PGSC0003DMG400020118 Solanum tuberosum
PGSC0003DMG400029501 Solanum tuberosum
Phvul.001G147800 Phaseolus vulgaris
Phvul.002G181800 Phaseolus vulgaris
Phvul.003G014200 Phaseolus vulgaris
Phvul.007G168900 Phaseolus vulgaris
Potri.002G210732 Populus trichocarpa
Potri.008G138900 Populus trichocarpa
Potri.010G102100 Populus trichocarpa
Potri.014G137700 Populus trichocarpa
Prupe.1G337300 Prunus persica
Prupe.8G247100 Prunus persica
Psat3g066240 Pisum sativum
Psat6g095520 Pisum sativum
Psat6g170080 Pisum sativum
PSO017G6468 Papaver somniferum
PSO170G3875 Papaver somniferum
PSO407G0096 Papaver somniferum
PSO478G4783 Papaver somniferum
QL03p038975 Quercus lobata
QL12p022937 Quercus lobata
RcHm_v2.0_Chr4g0442091 Rosa chinensis
RcHm_v2.0_Chr6g0291901 Rosa chinensis
Rhsim01G0277000 Rhododendron simsii
Rhsim09G0086100 Rhododendron simsii
Rhsim11G0151100 Rhododendron simsii
Rhsim11G0153100 Rhododendron simsii
Rhsim13G0021800 Rhododendron simsii
Sabra10G0074700 Salix brachista
Sabra10G0074900 Salix brachista
Sabra14G0103900 Salix brachista
SalBow2G1635 Salvia bowleyana
SalBow6G6195 Salvia bowleyana
SalBow8G3945 Salvia bowleyana
Sc04g0005730 Simmondsia chinensis
Sc05g0005140 Simmondsia chinensis
Sc10g0003380 Simmondsia chinensis
Sed0010868 Sechium edule
Sed0013993 Sechium edule
Sed0015425 Sechium edule
Sed0019403 Sechium edule
SEGI_03240 Sequoiadendron giganteum
SEGI_37836 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05789 Striga asiatica
SGA_v2.0_scaffold1G00440 Striga asiatica
SGA_v2.0_scaffold23G10131 Striga asiatica
SHI04279 Sapria himalayana
SHI04280 Sapria himalayana
SHI15308 Sapria himalayana
SHI15311 Sapria himalayana
SMO228G0139 Selaginella moellendorffii
SMO271G0151 Selaginella moellendorffii
SMO327G0044 Selaginella moellendorffii
Solyc04g008240.3 Solanum lycopersicum
Solyc06g084380.4 Solanum lycopersicum
Solyc09g074050.3 Solanum lycopersicum
Sopen04g003360 Solanum pennellii
Sopen06g035770 Solanum pennellii
Sopen09g028870 Solanum pennellii
Sp1g13150 Schrenkiella parvula
Sp4g29980 Schrenkiella parvula
Sp6g02980 Schrenkiella parvula
TAR365G1254 Trochodendron aralioides
TAR371G0411 Trochodendron aralioides
TAR629G2357 Trochodendron aralioides
THA.LOC104802219 Tarenaya hassleriana
THA.LOC104815949 Tarenaya hassleriana
THA.LOC104817542 Tarenaya hassleriana
THA.LOC104822175 Tarenaya hassleriana
THA.LOC104823550 Tarenaya hassleriana
THA.LOC104824118 Tarenaya hassleriana
Thecc.01G285100 Theobroma cacao
Thecc.02G304900 Theobroma cacao
Thhalv10001455m.g Eutrema salsugineum
Thhalv10007113m.g Eutrema salsugineum
Thhalv10028541m.g Eutrema salsugineum
TPR.G13297 Trifolium pratense
TPR.G32822 Trifolium pratense
TPR.G34564 Trifolium pratense
TWI23G1190 Tripterygium wilfordii
TWI59G0748 Tripterygium wilfordii
unitig_0.g107 Utricularia gibba
unitig_0.g1197 Utricularia gibba
unitig_0.g1198 Utricularia gibba
unitig_22.g5608 Utricularia gibba
unitig_744.g24485 Utricularia gibba
unitig_8.g4017 Utricularia gibba
vmacro02542 Vaccinium macrocarpon
vmacro14943 Vaccinium macrocarpon
VMungo0251G3421 Vigna mungo
VMungo0720G1809 Vigna mungo
VMungo1215G1819 Vigna mungo
VMungo1383G1710 Vigna mungo
Zm00001eb010150 Zea mays
Zm00001eb287600 Zea mays
Zm00001eb346760 Zea mays

User provided reference genes

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