Gene: Solyc09g074050.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g074050.3
  • Transcript Identifier Solyc09g074050.3.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 61963479-61969958 : positive

Gene Family Information

  • ID HOM05D001881
  • #Genes/#Species 350/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g074050.3.1
  • uniprot A0A3Q7J0W0
  • gene_id Solyc09g074050

Descriptions

  • Description 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein (AHRD V3.3 *-* G5DX62_SILLA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006402
IEA
GOA DatabasemRNA catabolic process
GO:0006402
IEA
InterPromRNA catabolic process
GO:0070988
IEA
GOA Databasedemethylation
GO:0080167
ISO
PLAZA Integrative Orthologyresponse to karrikin AT4G02940
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT4G02940
GO:0035513
ISO
PLAZA Integrative Orthologyoxidative RNA demethylation AT4G02940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0003729
IEA
InterPromRNA binding
GO:0032451
IEA
GOA Databasedemethylase activity
GO:0032451
IEA
InterProdemethylase activity
GO:1990931
ISO
PLAZA Integrative OrthologyRNA N6-methyladenosine dioxygenase activity AT4G02940

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
IPR044842 RNA demethylase ALKBH9B/ALKBH10B-like
Mapman id Description
16.5.8.3.2 RNA processing.RNA modification.mRNA methylation.N6-methyladenosine demethylation.demethylase (ALKBH10)