Gene: AT2G48080

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G48080
  • Transcript Identifier AT2G48080.1
  • Gene Type Coding gene
  • Location Chr2 : 19665192-19667092 : negative

Gene Family Information

  • ID HOM05D001881
  • #Genes/#Species 350/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G48080.1
  • uniprot F4IN63

Descriptions

  • Description oxidoreductase, 2OG-Fe(II) oxygenase family protein
  • Computational description oxidoreductase, 2OG-Fe(II) oxygenase family protein; BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G02940.1); Has 179 Blast hits to 160 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 24; Fungi - 0; Plants - 151; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006402
IEA
Gene OntologymRNA catabolic process
GO:0006402
IEA
InterPromRNA catabolic process
GO:0070988
IEA
GOA Databasedemethylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IEA
Gene OntologymRNA binding
GO:0003729
IEA
InterPromRNA binding
GO:0032451
IEA
Gene Ontologydemethylase activity
GO:0032451
IEA
InterProdemethylase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
IPR044842 RNA demethylase ALKBH9B/ALKBH10B-like
Mapman id Description
16.5.8.3.2 RNA processing.RNA modification.mRNA methylation.N6-methyladenosine demethylation.demethylase (ALKBH10)