Gene: Solyc04g008240.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g008240.3
  • Transcript Identifier Solyc04g008240.3.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 1948908-1955316 : positive

Gene Family Information

  • ID HOM05D001881
  • #Genes/#Species 350/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g008240.3.1
  • uniprot A0A3Q7FZE6
  • gene_id Solyc04g008240

Descriptions

  • Description 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A8MRW3_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006402
IEA
GOA DatabasemRNA catabolic process
GO:0006402
IEA
InterPromRNA catabolic process
GO:0070988
IEA
GOA Databasedemethylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0003729
IEA
InterPromRNA binding
GO:0032451
IEA
GOA Databasedemethylase activity
GO:0032451
IEA
InterProdemethylase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G14710

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
IPR044842 RNA demethylase ALKBH9B/ALKBH10B-like
Mapman id Description
35.1 not assigned.annotated